| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3761992 | 10 (0.090) | 132 (1.230) | 65/96 | 0.0 | 91.7% | intergenic (‑37/‑191) | yibF/rhsA | glutathione transferase‑like protein YibF/rhs element protein RhsA |
| ? | NC_000913 | 3770243 = | 14 (0.130) | coding (1137/1137 nt) | yibH | inner membrane protein YibH | |||||
Only 100 of 150 total aligned reads displayed.
ATAATTAGTCCTTACAAGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGCA > NC_000913/3770194‑3770292 | gacgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggct > 1:1498348‑M2/50‑50 (MQ=255) acgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggct > 1:2185588‑M2/49‑49 (MQ=255) acgagtttcatgccgagtcctttgtgcgagcaaaaatatcagtatggcTc < 2:5336023‑M2/2‑1 (MQ=255) cgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTc > 2:3095664‑M2/48‑49 (MQ=255) cgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCa < 1:1058958‑M2/3‑1 (MQ=255) cgagtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCa < 1:134958‑M2/3‑1 (MQ=255) cgagtttcatgccgagtccttggtgcgaggaaaaatatcagtatggcTCa < 2:403038‑M2/3‑1 (MQ=255) aatTAGTCCTTACAAGGAGCAAAGTTCCATAATCTCCcccctccccctc > 1:4528626/1‑49 (MQ=255) ttAGTCCTTACAAGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAAt < 1:989726/50‑1 (MQ=255) gtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATg < 2:1383413‑M2/6‑1 (MQ=255) gtttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATg < 1:2938644‑M2/6‑1 (MQ=255) ttcatgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGAt > 1:3704418‑M2/43‑50 (MQ=255) ccTTACAAGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAATGATc > 2:527358/1‑49 (MQ=255) catgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATc > 2:1195829‑M2/41‑49 (MQ=255) catgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATc < 1:2174452‑M2/9‑1 (MQ=255) atgccgagtcctttgtgcgaggcaacatctcagtatggcTCAATGAccc > 2:2960811‑M2/40‑49 (MQ=255) atgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATcc > 2:939560‑M2/40‑49 (MQ=255) atgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATcc > 2:3904240‑M2/40‑49 (MQ=255) atgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATcc > 1:4109361‑M2/40‑49 (MQ=255) atgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGAGcc < 2:3915110‑M2/10‑1 (MQ=255) tgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCaa < 2:2372295‑M2/12‑1 (MQ=255) tgccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCa > 1:4773883‑M2/39‑49 (MQ=255) ccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAAt < 1:933008‑M2/14‑1 (MQ=255) ccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAAt < 2:2583257‑M2/14‑1 (MQ=255) ccgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAAt < 1:1267094‑M2/14‑1 (MQ=255) aCAAGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAATGATCCaaa > 1:2256481/1‑49 (MQ=255) aCAAGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAATGATCCaa < 1:5276961/48‑1 (MQ=255) cgagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATa < 2:5119843‑M2/15‑1 (MQ=255) gagtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATa > 2:351819‑M2/35‑49 (MQ=255) aaGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAATGATCCAAATa > 1:131863/1‑49 (MQ=255) agtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATa > 2:4975546‑M2/34‑48 (MQ=255) agtcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATa > 2:3519869‑M2/34‑48 (MQ=255) tcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATa > 1:3003734‑M2/32‑46 (MQ=255) tcctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGa < 1:5316704‑M2/19‑1 (MQ=255) cctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGa > 2:4074381‑M2/31‑49 (MQ=255) cctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGa > 2:1524123‑M2/31‑49 (MQ=255) ctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGAt < 2:4156761‑M2/20‑1 (MQ=255) ctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGAt < 1:3617576‑M2/20‑1 (MQ=255) ctttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATa < 1:5108635‑M2/21‑1 (MQ=255) ctttgtgcgaagaaaaatatcagtatggcTCAATGATCCAAATAAAGAt < 2:4990350‑M2/20‑1 (MQ=255) tttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATaa > 2:4785641‑M2/29‑50 (MQ=255) tttgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATaa > 1:2875513‑M2/29‑50 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATaa < 2:1357929‑M2/22‑1 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAAt < 1:4249307‑M2/23‑1 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAAt < 2:1895134‑M2/23‑1 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAAt < 2:1574543‑M2/23‑1 (MQ=255) tgtgcgaggaaaaatatcagtatggcTCAATGAACCGAATAAGGAGaa < 2:252392‑M2/22‑1 (MQ=255) gtgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATg < 2:2119012‑M2/24‑1 (MQ=255) tgcgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCa < 2:983237‑M2/26‑1 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCAt < 1:4228267‑M2/27‑1 (MQ=255) cgaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc < 2:1037922‑M2/28‑1 (MQ=255) gaggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc > 2:2661882‑M2/22‑49 (MQ=255) aggacaaatatcagtatggcTCATTGATCCAAATAAAGGTAATGCATcc > 2:3312165‑M2/21‑49 (MQ=255) aggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATc > 1:4146137‑M2/21‑48 (MQ=255) aggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCa < 2:2053224‑M2/30‑1 (MQ=255) aggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCa < 2:2113137‑M2/30‑1 (MQ=255) aggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCa < 1:4875409‑M2/30‑1 (MQ=255) aggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCa < 1:1338029‑M2/30‑1 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg < 1:105439‑M2/31‑1 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg > 2:518467‑M2/20‑50 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg > 2:4763464‑M2/20‑50 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg < 2:4137870‑M2/31‑1 (MQ=255) ggaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAg > 1:1599499‑M2/20‑50 (MQ=255) aTAATCTCCCCCCTCCCCCTCAATGATCCAAATAAAGATAATGCATCCAg > 1:1938949/1‑50 (MQ=255) gaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGc > 1:897726‑M2/19‑50 (MQ=255) gaaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGc > 1:73070‑M2/19‑50 (MQ=255) aaaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCt < 1:66872‑M2/33‑1 (MQ=255) aaTCTTCCCCCTCCCCCTCAATGATCCAAATAAAGATAATGCATCCAgat > 2:2618784/1‑48 (MQ=255) aaaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTg > 1:4691579‑M2/17‑50 (MQ=255) aaatatcagtatggcTCAATGCTCCAAATAAAGATAATGCATCCAGCTgg > 2:4440717‑M2/16‑50 (MQ=255) aaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTgg > 2:891866‑M2/16‑50 (MQ=255) aaatatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTgg > 1:1470218‑M2/16‑50 (MQ=255) tatcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCa > 1:2226777‑M2/13‑50 (MQ=255) atcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAt > 1:5106513‑M2/12‑50 (MQ=255) tcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAtt > 2:24328‑M2/11‑50 (MQ=255) tcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAtt < 1:3870175‑M2/40‑1 (MQ=255) tcagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAtt > 2:788883‑M2/11‑50 (MQ=255) cccctccccctcAATGATCCAAATAAAGATAATGCATCCAGCTGGTCAtt < 1:670701/50‑1 (MQ=255) cagtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTc > 2:4429225‑M2/10‑50 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTc < 2:1877781‑M2/41‑1 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTc < 2:2424414‑M2/41‑1 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTc < 1:204696‑M2/41‑1 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:2097036‑M2/9‑50 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:3872068‑M2/9‑50 (MQ=255) agtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt < 2:1403038‑M2/42‑1 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCtt < 2:619863‑M2/43‑1 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 2:636969‑M2/8‑49 (MQ=255) gtatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 2:2307783‑M2/8‑49 (MQ=255) ctccccctcAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCtt < 1:1744473/50‑1 (MQ=255) tatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 2:4323780‑M2/7‑48 (MQ=255) tatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCt > 1:1655619‑M2/7‑48 (MQ=255) tatggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTa < 1:4969880‑M2/44‑1 (MQ=255) tggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTag > 2:3096047‑M2/5‑49 (MQ=255) ggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTag > 1:3168661‑M2/4‑48 (MQ=255) ggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTag > 2:1944688‑M2/4‑48 (MQ=255) ggcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTag > 2:2983738‑M2/4‑48 (MQ=255) gcTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagca < 1:4655263‑M2/47‑1 (MQ=255) cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagcagc < 2:3990347‑M2/49‑1 (MQ=255) cTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTagcag > 2:1084448‑M2/2‑49 (MQ=255) tcAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAgcagca > 2:3184970/1‑50 (MQ=255) | ATAATTAGTCCTTACAAGGAGCAAAGTTCCATAATCTCCCCCCTCCCCCTCAATGATCCAAATAAAGATAATGCATCCAGCTGGTCATTCTTAGCAGCA > NC_000913/3770194‑3770292 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |