| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090346 | 12 (0.110) | 138 (1.260) | 65/98 | 0.0 | 92.6% | intergenic (+94/‑1) | yggI/endA | conserved protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3091055 = | 10 (0.090) | intergenic (+1/‑79) | endA/rsmE | DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase | |||||
Only 100 of 153 total aligned reads displayed.
CAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACC > NC_000913/3091006‑3091104 | ccaaaacagctttcgctacgttgctggctcgttttaacacggagaagtgc < 2:3077647‑M2/1‑1 (MQ=255)ccaaaacagctttcgctacgttgctggctcgttttaacacggagaagtgc > 1:4283510‑M2/50‑50 (MQ=255) caaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 2:2532333‑M2/49‑50 (MQ=255) caaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 2:4773904‑M2/49‑50 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:4645545‑M2/48‑49 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:2187256‑M2/48‑49 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 2:3297919‑M2/48‑49 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCt < 1:2080268‑M2/3‑1 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCt < 1:2202146‑M2/3‑1 (MQ=255) tCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTa > 1:4528037/1‑50 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa < 2:870315‑M2/4‑1 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 2:2921514‑M2/47‑50 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 2:437075‑M2/47‑50 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 2:4209491‑M2/47‑50 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa < 1:4528198‑M2/4‑1 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTac < 2:3717156‑M2/5‑1 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTac < 2:5017508‑M2/5‑1 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTac < 2:4557157‑M2/5‑1 (MQ=255) acagctttcgctacgttgctggctcgttttaacacggagaagtgCCTaca > 1:3700301‑M2/45‑50 (MQ=255) acagctttcgctacgttgctggctcgttttaacacggagaagtgCCTaca < 2:3618933‑M2/6‑1 (MQ=255) tAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTacac > 2:1252941/1‑50 (MQ=255) cagctttcgctacgttgctggctcgttttaacacggagaagtgCCTacac < 2:754‑M2/7‑1 (MQ=255) agctttcgctacgttgctggctcgttttaacacggagaagtgCCTacac > 2:211176‑M2/43‑49 (MQ=255) agctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACt < 1:3174797‑M2/8‑1 (MQ=255) agctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACt < 2:3297132‑M2/8‑1 (MQ=255) gctttcgctacgttgctggctcgttttaacacggagaagtgCCTacac > 2:3174621‑M2/42‑48 (MQ=255) gctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTa < 2:2744425‑M2/9‑1 (MQ=255) ctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAg < 1:510990‑M2/10‑1 (MQ=255) cccGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAg > 1:442029/1‑50 (MQ=255) tttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc > 2:3962044‑M2/40‑50 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc < 1:139106‑M2/11‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc < 2:2332032‑M2/11‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc < 1:3478765‑M2/11‑1 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa > 1:3035671‑M2/36‑50 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa > 2:1568638‑M2/36‑50 (MQ=255) ctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAt > 2:3152659‑M2/35‑50 (MQ=255) ctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAt < 1:3160181‑M2/16‑1 (MQ=255) ctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAt > 2:3919909‑M2/35‑50 (MQ=255) acgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTc > 1:4788841‑M2/33‑50 (MQ=255) acgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTc > 1:348514‑M2/33‑50 (MQ=255) cgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTc < 1:3337250‑M2/18‑1 (MQ=255) cgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCt < 1:1150948‑M2/19‑1 (MQ=255) cgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCt < 2:1096144‑M2/19‑1 (MQ=255) cgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCt < 1:2822067‑M2/19‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 2:2238541‑M2/31‑50 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 1:1675712‑M2/31‑50 (MQ=255) ttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCttt < 2:239797‑M2/21‑1 (MQ=255) ttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCttt > 1:4790649‑M2/30‑50 (MQ=255) tgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt > 2:422620‑M2/29‑50 (MQ=255) gctggctcgttttaacacgtagaagtgCCTACACTAGCGGGATTCtttt < 2:563251‑M2/22‑1 (MQ=255) gctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCttttt > 2:484779‑M2/28‑50 (MQ=255) gctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt < 1:3963882‑M2/22‑1 (MQ=255) gctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt < 2:3408124‑M2/22‑1 (MQ=255) ctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTg > 1:4939353‑M2/27‑50 (MQ=255) ctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTg < 1:1769069‑M2/24‑1 (MQ=255) ggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt > 2:5182450‑M2/25‑49 (MQ=255) ggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt > 1:5013972‑M2/25‑49 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGtt > 2:5085542‑M2/24‑49 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTa < 2:4528037‑M2/27‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTa < 1:757920‑M2/27‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTa < 2:814676‑M2/27‑1 (MQ=255) ctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTaa > 1:5092906‑M2/23‑50 (MQ=255) ctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTaa < 1:4873930‑M2/28‑1 (MQ=255) gCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAAcc > 1:2013123/1‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc > 2:1506850‑M2/20‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc > 2:1674215‑M2/20‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcc < 2:1006559‑M2/30‑1 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAc < 1:1114429‑M2/29‑1 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAc < 1:3770749‑M2/29‑1 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAc < 2:3832383‑M2/29‑1 (MQ=255) ttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 2:2094876‑M2/19‑50 (MQ=255) ttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 2:2253946‑M2/19‑50 (MQ=255) tttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 2:1394446‑M2/18‑49 (MQ=255) tttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 1:4604788‑M2/18‑49 (MQ=255) tttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 1:5189103‑M2/18‑49 (MQ=255) ttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTa > 1:219016‑M2/17‑50 (MQ=255) taacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTa < 2:3648782‑M2/34‑1 (MQ=255) taacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTa < 1:757265‑M2/34‑1 (MQ=255) taacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAc > 1:3871945‑M2/16‑50 (MQ=255) taacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAc > 2:1831860‑M2/16‑50 (MQ=255) acacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAccc < 1:4887435‑M2/37‑1 (MQ=255) cgAAAGAGCTAACCTACGCTAGCGGGATTCTTTTTGTTAACCCCTTcccc < 2:3503441/50‑1 (MQ=255) cacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTGcccc < 2:5246845‑M2/38‑1 (MQ=255) cacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcccc < 2:1154727‑M2/38‑1 (MQ=255) cacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAccc > 2:2528272‑M2/13‑49 (MQ=255) cacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAccc > 2:3569445‑M2/13‑49 (MQ=255) acggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCa < 2:4510506‑M2/39‑1 (MQ=255) acggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCa < 2:1753220‑M2/39‑1 (MQ=255) acggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCa > 2:3460901‑M2/12‑50 (MQ=255) aaaGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAc > 2:635870/1‑50 (MQ=255) agaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAcgcg > 2:4068915‑M2/8‑50 (MQ=255) gaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAcgcg > 1:1530702‑M2/7‑49 (MQ=255) gaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGt < 1:2407395‑M2/44‑1 (MQ=255) agtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTa > 2:5041271‑M2/5‑49 (MQ=255) tgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTTCCCCACGCGTAcag < 2:1391955‑M2/48‑2 (MQ=255) tgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACaa < 2:4609159‑M2/48‑1 (MQ=255) tgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACaa > 2:636441‑M2/3‑50 (MQ=255) tgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACaa < 2:3582848‑M2/48‑1 (MQ=255) gCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAc > 2:3722721‑M2/2‑50 (MQ=255) ccTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAcc < 2:2995956/50‑1 (MQ=255) | CAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACC > NC_000913/3091006‑3091104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |