| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 332365 | 0 (0.000) | 177 (1.520) | 78/98 | 0.0 | 100% | intergenic (+489/‑6) | yahV/pdeL | protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL |
| ? | NC_000913 | 377317 = | NA (NA) | intergenic (+6/+218) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
Only 100 of 177 total aligned reads displayed.
GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332317‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAG > NC_000913/377317‑377365 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA < 2:2921550/50‑1 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA < 1:1948996/50‑1 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA > 1:1913204/1‑50 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA < 2:364984/50‑1 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA < 1:1885859/50‑1 ATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT < 1:2039577/50‑1 ATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT < 1:4037385/50‑1 ATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT < 2:2406796/50‑1 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATA < 1:722263/50‑1 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATA < 1:3419293/50‑1 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 2:2654138/1‑49 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 2:2324485/1‑48 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:1565121/1‑48 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG > 2:3235907/1‑50 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG > 2:3080317/1‑50 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:2462971/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAA < 1:2781633/49‑1 AGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCG > 1:861785/1‑50 GGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGT < 1:2076264/50‑1 GTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTG < 1:2800197/50‑1 GTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTG < 1:3172594/50‑1 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC < 2:564177/50‑1 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGC < 1:2961909/50‑1 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG < 1:4472346/49‑1 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAG < 1:3264190/49‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:4058623/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 2:2355750/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT > 1:3831447/1‑50 TCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG > 1:492726/1‑50 TCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG > 2:4549821/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCC > 2:10402/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCC > 2:2721854/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGC < 1:2333814/49‑1 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG < 2:2808664/48‑1 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG < 1:991921/48‑1 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT < 1:2131220/50‑1 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT > 1:4325454/1‑50 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT > 2:1088863/1‑50 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT > 1:2520270/1‑50 TACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT > 1:4158332/1‑50 ACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCT > 2:2128816/1‑49 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGA > 2:661510/1‑50 CTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGA < 1:1494010/50‑1 GAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG > 1:2682186/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC > 1:2905478/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:1266714/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:4349381/48‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCG < 2:2519961/50‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCG < 1:1726991/50‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCG < 2:2178344/50‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC > 2:2066795/1‑49 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC > 1:3101379/1‑50 AGCGAGAAAAGATAAAGGGGGATAAGGCGTGCGCAGATGCCTGATGCGAC > 1:2568927/1‑50 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG > 1:3156222/1‑50 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG < 1:1343787/50‑1 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCT < 2:3956069/50‑1 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCT < 1:3972896/50‑1 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCT < 2:4101233/50‑1 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCT < 2:1244040/50‑1 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 2:1594434/1‑49 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT < 2:2821800/50‑1 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT > 2:321837/1‑50 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT > 2:136832/1‑50 TAAAAGATAAAGGTGGATAAGTAGTGCGCAGATGCCTGATGCGACGCTAT > 1:3055443/1‑50 AAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG > 1:3714896/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC < 2:1811665/50‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:1833935/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:1199686/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:2486680/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG < 1:3760256/49‑1 AAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCG < 1:146575/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 2:2376024/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 1:2270921/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 2:48464/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 2:2739929/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 1:1066075/50‑1 GATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCG > 1:3861392/1‑50 GATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCG < 2:4199605/50‑1 ATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGT > 1:115645/1‑50 ATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGT < 1:297866/50‑1 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC > 2:3385163/1‑50 AAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:1585964/1‑50 AAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:911456/1‑50 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTT < 2:4227883/50‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTT < 2:3750111/50‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 2:883496/1‑49 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT < 2:4290253/49‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:67080/1‑49 AGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTA < 1:504558/50‑1 AGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTA < 2:1504676/50‑1 GGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT < 2:1354219/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATC < 2:3545678/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATC < 1:2891430/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 2:261230/1‑49 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:3912629/1‑49 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 2:3619719/1‑49 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 2:2278371/1‑49 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:2197223/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 2:452120/1‑48 GGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAG > 1:1434748/1‑50 GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332317‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAG > NC_000913/377317‑377365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |