| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 332365 | 0 (0.000) | 177 (1.520) | 78/98 | 0.0 | 100% | intergenic (+489/‑6) | yahV/pdeL | protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL |
| ? | NC_000913 | 377317 = | NA (NA) | intergenic (+6/+218) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
Only 100 of 182 total aligned reads displayed.
ACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGG > NC_000913/377268‑377366 | gaatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgg < 1:2813915‑M2/1‑1 (MQ=255) aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa < 2:364984‑M2/2‑1 (MQ=255) aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa > 1:4050117‑M2/49‑50 (MQ=255) aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa < 1:1948996‑M2/2‑1 (MQ=255) aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa < 2:2921550‑M2/2‑1 (MQ=255) aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa > 1:144145‑M2/49‑50 (MQ=255) aatcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGa > 1:760139‑M2/49‑50 (MQ=255) atcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGAt < 2:2406796‑M2/3‑1 (MQ=255) tcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGAt > 2:2654138‑M2/47‑49 (MQ=255) tcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGATa < 1:464829‑M2/4‑1 (MQ=255) tcgacaggtaatcactcatactgaacagcgataaaagataaaggtgGATa < 1:3419293‑M2/4‑1 (MQ=255) cgacaggcaatcactcatactgaacagcgataaaagataaaggtgGAt > 1:1869082‑M2/46‑48 (MQ=255) gacaggtaatcactcatactgaacagcgataaaagataaaggtgGATaa < 1:497104‑M2/5‑1 (MQ=255) gacaggtaatcactcatactgaacagcgataaaagataaaggtgGATaa < 1:2602327‑M2/5‑1 (MQ=255) gacaggtaatcactcatactgaacagcgataaaagataaaggtgGATaa < 2:3275794‑M2/5‑1 (MQ=255) gacaggtaatcactcatactgaacagcgataaaagataaaggtgGATaa < 1:2529990‑M2/5‑1 (MQ=255) gacaggtaatcactcatactgaacagcgataaaagataaaggtgGATAAg > 2:3235907‑M2/45‑50 (MQ=255) gacaggtaatcactcatactgaacagcgataaaagataaaggtgGATAAg > 2:3080317‑M2/45‑50 (MQ=255) acaggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGt < 2:3213027‑M2/7‑1 (MQ=255) acaggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGt < 2:1501208‑M2/7‑1 (MQ=255) ggtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGt < 1:2076264‑M2/10‑1 (MQ=255) gtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTg < 1:3172594‑M2/11‑1 (MQ=255) gtaatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTg < 1:2800197‑M2/11‑1 (MQ=255) gtaatcactcatactgaacagcgataaaagataaaggggGATAAGTCGTg > 2:2320401‑M2/40‑50 (MQ=255) taatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgc < 1:3156084‑M2/12‑1 (MQ=255) taatcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgc < 2:564177‑M2/12‑1 (MQ=255) tcactcatactgaacagcgataaaagataaaggtgGATAAGTCGTgcg > 1:2074262‑M2/36‑48 (MQ=255) actcatactgaacagcgataaaagataaaggtgGATAAGTCGTgcg > 1:2361665‑M2/34‑46 (MQ=255) actcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAg < 1:3264190‑M2/16‑1 (MQ=255) ctcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGAt < 1:4058623‑M2/18‑1 (MQ=255) ctcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGAt < 2:2355750‑M2/18‑1 (MQ=255) ctcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGAt < 1:1904482‑M2/18‑1 (MQ=255) ctcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGAt > 1:3831447‑M2/33‑50 (MQ=255) ctcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGAt < 2:1063292‑M2/18‑1 (MQ=255) tcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATg > 2:4532874‑M2/32‑50 (MQ=255) tcatactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATg > 2:3891311‑M2/32‑50 (MQ=255) atactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATg < 1:4418198‑M2/19‑1 (MQ=255) atactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATg < 1:991921‑M2/19‑1 (MQ=255) atactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGcc > 2:2721854‑M2/30‑50 (MQ=255) tactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCt > 1:4158332‑M2/29‑50 (MQ=255) tactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCt > 1:4325454‑M2/29‑50 (MQ=255) tactgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCt < 1:2131220‑M2/22‑1 (MQ=255) tactgaacagcgataaaagataaaggcgGATAAGTCGTGCGCAGATGCCt > 1:2891853‑M2/29‑50 (MQ=255) ctgaacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGa > 2:661510‑M2/27‑50 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGAt < 2:411189‑M2/25‑1 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGAt < 1:1491666‑M2/25‑1 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGAt < 1:866039‑M2/25‑1 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATg < 1:2515788‑M2/26‑1 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATg < 2:249154‑M2/26‑1 (MQ=255) aacagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGc < 1:1266714‑M2/27‑1 (MQ=255) acagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGc > 1:2299827‑M2/23‑49 (MQ=255) acagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGc > 2:2066795‑M2/23‑49 (MQ=255) acagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCg < 1:1726991‑M2/28‑1 (MQ=255) acagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCg < 2:2178344‑M2/28‑1 (MQ=255) cagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGa > 1:2033550‑M2/22‑50 (MQ=255) cagcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGa < 2:3573090‑M2/29‑1 (MQ=255) agcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGAc > 1:3101379‑M2/21‑50 (MQ=255) agcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGAc < 2:2132973‑M2/30‑1 (MQ=255) agcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGAc < 2:2252492‑M2/30‑1 (MQ=255) agcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGAc < 2:399074‑M2/30‑1 (MQ=255) gcgataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACg < 1:1343787‑M2/31‑1 (MQ=255) gataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGc > 2:1594434‑M2/18‑49 (MQ=255) gataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGc > 2:2774639‑M2/18‑49 (MQ=255) gataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCt < 1:3972896‑M2/33‑1 (MQ=255) gataaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCt < 2:1244040‑M2/33‑1 (MQ=255) taaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAt < 2:2821800‑M2/35‑1 (MQ=255) taaaagataaaggtgGATAAGTAGTGCGCAGATGCCTGATGCGACGCTAt > 1:3055443‑M2/16‑50 (MQ=255) aaaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATg > 1:3714896‑M2/15‑50 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc < 2:1811665‑M2/37‑1 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc > 1:2486680‑M2/14‑50 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc > 1:1833935‑M2/14‑50 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc < 1:1558131‑M2/37‑1 (MQ=255) aaagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgc > 1:1199686‑M2/14‑50 (MQ=255) aagataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcg > 2:3492055‑M2/13‑50 (MQ=255) agataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcgc < 2:2376024‑M2/39‑1 (MQ=255) agataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcgc < 2:48464‑M2/39‑1 (MQ=255) agataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcgc < 2:2739929‑M2/39‑1 (MQ=255) agataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATgcgc < 1:1066075‑M2/39‑1 (MQ=255) gataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGcgcg > 1:3861392‑M2/11‑50 (MQ=255) ataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGt > 1:115645‑M2/10‑50 (MQ=255) ataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGt < 1:297866‑M2/41‑1 (MQ=255) ataaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGt < 1:3722319‑M2/41‑1 (MQ=255) taaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTc > 1:2713450‑M2/9‑50 (MQ=255) aaaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCt > 1:1585964‑M2/8‑50 (MQ=255) aaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCtt < 1:921275‑M2/44‑1 (MQ=255) aaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCtt < 2:4227883‑M2/44‑1 (MQ=255) aaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCtt < 2:3750111‑M2/44‑1 (MQ=255) aaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCt > 2:883496‑M2/7‑49 (MQ=255) aaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCt > 1:2231312‑M2/7‑49 (MQ=255) aaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCt < 2:4290253‑M2/43‑1 (MQ=255) aaggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCt > 1:67080‑M2/7‑49 (MQ=255) aggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTa < 1:504558‑M2/45‑1 (MQ=255) aggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTa < 2:1504676‑M2/45‑1 (MQ=255) ggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt < 2:114415‑M2/46‑1 (MQ=255) ggtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt < 2:1354219‑M2/46‑1 (MQ=255) gtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 1:3912629‑M2/4‑49 (MQ=255) gtgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 2:261230‑M2/4‑49 (MQ=255) tgGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAt > 2:452120‑M2/3‑48 (MQ=255) gGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAg > 1:2905979‑M2/2‑50 (MQ=255) gGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAg > 1:1434748‑M2/2‑50 (MQ=255) | ACCCGTATGCCGACTTCAAAGTGCCTGATGATTTGATGTGGTAAACATAGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAGG > NC_000913/377268‑377366 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |