| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 332365 | 0 (0.000) | 177 (1.520) | 78/98 | 0.0 | 100% | intergenic (+489/‑6) | yahV/pdeL | protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL |
| ? | NC_000913 | 377317 = | NA (NA) | intergenic (+6/+218) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
Only 100 of 178 total aligned reads displayed.
GGAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGTGTTCATGAATTCATGTGATTTTCGTGTTTTTCTGCAAGAGTTCGGTAC > NC_000913/332316‑332414 | ggAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGgtg < 1:2376370/50‑1 (MQ=255) gAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGg < 1:2813915‑M1/50‑2 (MQ=255) aaTCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGga < 1:1948996‑M1/50‑3 (MQ=255) aaTCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGga < 2:364984‑M1/50‑3 (MQ=255) aaTCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGga > 1:1913204‑M1/1‑48 (MQ=255) aaTCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGga < 1:1885859‑M1/50‑3 (MQ=255) aaTCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGga < 2:2921550‑M1/50‑3 (MQ=255) aTCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgat < 1:4037385‑M1/50‑4 (MQ=255) aTCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgat < 2:2406796‑M1/50‑4 (MQ=255) aTCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgat < 1:2039577‑M1/50‑4 (MQ=255) tCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgata < 1:722263‑M1/50‑5 (MQ=255) tCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgat > 2:2654138‑M1/1‑46 (MQ=255) cGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgat > 1:1565121‑M1/1‑45 (MQ=255) gACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataag > 2:3235907‑M1/1‑44 (MQ=255) gACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataag > 1:3017389‑M1/1‑44 (MQ=255) gACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataag > 2:3080317‑M1/1‑44 (MQ=255) gACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataa < 1:497104‑M1/49‑6 (MQ=255) gACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataa < 1:2529990‑M1/49‑6 (MQ=255) gACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataa < 1:2602327‑M1/49‑6 (MQ=255) aCAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataagt < 2:3213027‑M1/50‑8 (MQ=255) aGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcg > 1:861785‑M1/1‑41 (MQ=255) ggTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgt < 1:2076264‑M1/50‑11 (MQ=255) gTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtg < 1:3172594‑M1/50‑12 (MQ=255) gTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtg < 1:2800197‑M1/50‑12 (MQ=255) gTAATCACTCATACTGAACAGCGATAAAAGATAAAGGGGgataagtcgtg > 2:2320401‑M1/1‑39 (MQ=255) tAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgc < 2:564177‑M1/50‑13 (MQ=255) tAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgc < 1:3156084‑M1/50‑13 (MQ=255) aTCACTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcg < 1:4472346‑M1/49‑14 (MQ=255) aCTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcag < 1:3264190‑M1/49‑17 (MQ=255) cTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagat < 2:2355750‑M1/50‑19 (MQ=255) cTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagat < 1:4058623‑M1/50‑19 (MQ=255) cTCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagat > 1:3831447‑M1/1‑32 (MQ=255) tCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatg > 2:4549821‑M1/1‑31 (MQ=255) tCATACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatg > 1:492726‑M1/1‑31 (MQ=255) aTACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcc > 2:2721854‑M1/1‑29 (MQ=255) aTACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcc > 2:10402‑M1/1‑29 (MQ=255) aTACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcc < 2:1956481‑M1/50‑22 (MQ=255) aTACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcc < 2:1244650‑M1/50‑22 (MQ=255) aTACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgc < 1:2333814‑M1/49‑21 (MQ=255) aTACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatg < 1:3844688‑M1/48‑20 (MQ=255) tACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcct > 2:1088863‑M1/1‑28 (MQ=255) tACTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcct < 1:2131220‑M1/50‑23 (MQ=255) tACTGAACAGCGATAAAAGATAAAGGCGgataagtcgtgcgcagatgcct > 1:2891853‑M1/1‑28 (MQ=255) aCTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcct > 2:2128816‑M1/1‑27 (MQ=255) cTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctga > 2:661510‑M1/1‑26 (MQ=255) cTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctga < 1:1494010‑M1/50‑25 (MQ=255) cTGAACAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctg < 1:3095961‑M1/49‑24 (MQ=255) aaCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgc < 1:1266714‑M1/50‑28 (MQ=255) aaCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatg < 2:249154‑M1/49‑27 (MQ=255) aaCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatg < 1:2515788‑M1/49‑27 (MQ=255) aaCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgat < 1:4299010‑M1/48‑26 (MQ=255) aaCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgat < 1:4349381‑M1/48‑26 (MQ=255) aaCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgat < 2:411189‑M1/48‑26 (MQ=255) aaCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgat < 1:866039‑M1/48‑26 (MQ=255) aCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcg < 2:2178344‑M1/50‑29 (MQ=255) aCAGCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcg < 1:1726991‑M1/50‑29 (MQ=255) gCGATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacg < 1:1343787‑M1/50‑32 (MQ=255) gATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgct < 2:1244040‑M1/50‑34 (MQ=255) gATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgct < 2:3956069‑M1/50‑34 (MQ=255) gATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgct < 2:4101233‑M1/50‑34 (MQ=255) gATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgc > 2:2774639‑M1/1‑17 (MQ=255) gATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgc > 1:3864991‑M1/1‑17 (MQ=255) gATAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgc > 2:1594434‑M1/1‑17 (MQ=255) tAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctat < 1:1693016‑M1/50‑36 (MQ=255) tAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctat > 2:136832‑M1/1‑15 (MQ=255) tAAAAGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctat < 2:2821800‑M1/50‑36 (MQ=255) aaaGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgc > 1:1199686‑M1/1‑13 (MQ=255) aaaGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgc > 1:2486680‑M1/1‑13 (MQ=255) aaaGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgc > 1:1833935‑M1/1‑13 (MQ=255) aaGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcg < 2:178308‑M1/50‑39 (MQ=255) aaGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcg < 1:146575‑M1/50‑39 (MQ=255) aGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgc < 2:2739929‑M1/50‑40 (MQ=255) aGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgc < 2:2376024‑M1/50‑40 (MQ=255) aGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgc < 2:48464‑M1/50‑40 (MQ=255) aGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgc < 1:2270921‑M1/50‑40 (MQ=255) aGATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgc < 1:1066075‑M1/50‑40 (MQ=255) gATAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcg < 1:3373384‑M1/50‑41 (MQ=255) aTAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgt > 1:115645‑M1/1‑9 (MQ=255) aTAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgt < 1:3722319‑M1/50‑42 (MQ=255) aTAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgt < 1:297866‑M1/50‑42 (MQ=255) tAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtc > 1:2713450‑M1/1‑8 (MQ=255) tAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtc < 1:638638‑M1/50‑43 (MQ=255) tAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtc > 1:4064055‑M1/1‑8 (MQ=255) tAAAGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtc > 2:3385163‑M1/1‑8 (MQ=255) aaaGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtct > 1:3962894‑M1/1‑7 (MQ=255) aaGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtctt < 1:921275‑M1/50‑45 (MQ=255) aaGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtctt < 2:4227883‑M1/50‑45 (MQ=255) aaGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtctt < 2:3750111‑M1/50‑45 (MQ=255) aaGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtct > 2:883496‑M1/1‑6 (MQ=255) aaGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtct > 1:2231312‑M1/1‑6 (MQ=255) aaGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtct < 2:4290253‑M1/49‑44 (MQ=255) aGGTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtctta < 2:1504676‑M1/50‑46 (MQ=255) gTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtcttatc < 2:3545678‑M1/50‑48 (MQ=255) gTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtcttat > 2:3619719‑M1/1‑3 (MQ=255) gTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtcttat > 2:2278371‑M1/1‑3 (MQ=255) gTGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtcttat > 2:261230‑M1/1‑3 (MQ=255) tGgataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtcttat > 2:452120‑M1/1‑2 (MQ=255) ggataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtcttatcag > 1:3680328‑M1/1‑1 (MQ=255) ggataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtcttatcag > 1:2905979‑M1/1‑1 (MQ=255) ggataagtcgtgcgcagatgcctgatgcgacgctatgcgcgtcttatcag > 1:1434748‑M1/1‑1 (MQ=255) | GGAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGTGTTCATGAATTCATGTGATTTTCGTGTTTTTCTGCAAGAGTTCGGTAC > NC_000913/332316‑332414 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |