| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,466,545 | Δ9,634 bp | [intS]–[ypdJ] | 15 genes [intS], yfdG, yfdH, yfdI, yfdK, yfdL, yfdM, yfdN, yfdO, yfdP, yfdQ, yfdR, yfdS, [yfdT], [ypdJ] |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2466545 | 2476178 | 9634 | 115 [0] | [0] 112 | [intS]–[ypdJ] | [intS],yfdG,yfdH,yfdI,yfdK,yfdL,yfdM,yfdN,yfdO,yfdP,yfdQ,yfdR,yfdS,[yfdT],[ypdJ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2466544 | 0 (0.000) | 111 (1.180) | 64/98 | 0.0 | 100% | intergenic (+161/‑1) | argW/intS | tRNA‑Arg/CPS‑53 (KpLE1) prophage; prophage CPS‑53 integrase |
| ? | NC_000913 | 2476179 = | 0 (0.000) | coding (86/141 nt) | ypdJ | CPS‑53 (KpLE1) prophage; putative uncharacterized protein YpdJ | |||||
Only 100 of 111 total aligned reads displayed.
TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCT < 1:5014066/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 1:6193943/50‑1 CGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGA < 1:5056287/50‑1 GGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAG < 1:6179869/50‑1 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:208814/1‑50 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:865899/50‑1 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:2138141/1‑50 GGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC < 1:4362014/50‑1 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCC < 1:1103519/50‑1 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCC < 1:322142/50‑1 GTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGC > 1:2000292/1‑49 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:3386500/1‑50 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA < 1:1095800/50‑1 TAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA < 1:5970316/50‑1 AAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCA > 1:5637986/1‑49 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA < 1:4727790/50‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:3527849/1‑50 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA < 1:2804358/50‑1 AAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCAT < 1:1861321/49‑1 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATAC < 1:3770198/50‑1 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:3711207/1‑49 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:3197682/1‑49 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:1025602/1‑49 AAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:1429116/1‑49 AAGTGGATAAAATAATTTTGCCCACCGGATTTTTGCCCTAGAGCCATACA < 1:810640/50‑1 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:4296365/1‑48 AAGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATA > 1:4870129/1‑48 AGTGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAG < 1:1731692/50‑1 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:2036836/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:6929430/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:5477731/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:1874033/1‑50 TGGATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCC > 1:1155813/1‑50 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTC < 1:5149635/50‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT < 1:1703273/49‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT < 1:6093839/49‑1 GATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCT > 1:640619/1‑49 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:5122852/1‑50 ATAAAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCA > 1:4609949/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:5026600/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC > 1:604561/1‑50 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC < 1:812229/50‑1 AAATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACAC < 1:3463648/50‑1 AATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACT < 1:3243405/50‑1 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:40234/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC > 1:1947504/1‑50 ATAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTC < 1:2461215/50‑1 TAATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCG < 1:3554013/50‑1 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:1698427/1‑50 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:5726816/1‑50 AATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA > 1:1061498/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:2784774/1‑50 ATTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGA < 1:6847445/49‑1 TTTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:2291090/1‑49 TTTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGAT > 1:3244857/1‑48 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 1:924492/49‑1 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 1:5056456/49‑1 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 1:4965067/49‑1 TTACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGA < 1:4528089/49‑1 TACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGG > 1:2670961/1‑50 ACCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC > 1:2936731/1‑50 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCC < 1:868790/50‑1 CCCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGC < 1:2933215/49‑1 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:1063136/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT > 1:2230188/1‑50 CCACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCT < 1:556706/50‑1 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT < 1:4893169/50‑1 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:1734367/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:2823181/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:7090201/1‑50 ACCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:6517281/1‑50 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTC < 1:815622/50‑1 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:6272871/1‑49 CCGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGT > 1:3488655/1‑49 CGGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCA < 1:1562549/50‑1 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:5183827/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:571313/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:5790064/1‑50 GGATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAG > 1:4973365/1‑50 GATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGT < 1:3966206/50‑1 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 1:5124640/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT > 1:1689690/1‑50 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT < 1:4677968/50‑1 ATTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTT < 1:2885391/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT < 1:2974699/50‑1 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT > 1:3220082/1‑50 TTTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTT > 1:2228240/1‑50 TTTTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTC > 1:2974368/1‑50 TTACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCT > 1:2419034/1‑49 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA < 1:1042011/49‑1 ACCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTA < 1:887997/49‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAA < 1:3119454/50‑1 CCCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAA < 1:4015380/49‑1 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:6495479/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:6039703/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:2002177/1‑50 CCTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:1108090/1‑50 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 1:1360958/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT < 1:927022/50‑1 CTAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAA > 1:1105909/1‑49 TGACGGGTAAAAAGTGGATAAAATAATTTTACCCACCGGATTTTTACCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2466496‑2466544‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TAGAGCCATACAGCCTCACACTCGATGAGGCCTGTCAGTTTCTTAAAAT > NC_000913/2476179‑2476227 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |