| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 59 (0.810) +CGAGATGGACG |
36/76 | 0.1 | 56.9% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 116 (1.230) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
Only 100 of 182 total aligned reads displayed.
ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 | attaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCg > 1:6059062/1‑50 (MQ=255)attaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCg > 1:4361619/1‑50 (MQ=255)attaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCg > 1:4349522/1‑50 (MQ=255)attaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCg > 1:1753933/1‑50 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:2733811/1‑50 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt < 1:3554939/50‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:5668146/1‑50 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:1840022/1‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:1056318/1‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:74361/1‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 1:1818268/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc > 1:5950412/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc < 1:1779737/49‑1 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatggacgGTcccc > 1:5223816‑M2/45‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt > 1:1695681‑M2/44‑50 (MQ=255) aggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCt > 1:7068279‑M2/44‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:5298442‑M2/8‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:4589558‑M2/8‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:1413638‑M2/8‑1 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:2182972‑M2/8‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCt < 1:6247993/49‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:6323457/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:3808094/50‑1 (MQ=255) gtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCg < 1:3370362‑M2/9‑1 (MQ=255) tAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGccc > 1:5855982/1‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGccc < 1:4854132‑M2/12‑1 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:636858/1‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:3517466/1‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcccc > 1:5872132/1‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGccc < 1:5389812/49‑1 (MQ=255) aGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCt > 1:91602/1‑50 (MQ=255) aGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCt > 1:1249057/1‑50 (MQ=255) aGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCt > 1:664786/1‑50 (MQ=255) cgggctgcaagttgcagaccgttacgagatggacgGTCCCCTcgccccct < 1:5666798‑M2/15‑3 (MQ=255) cgggctgcaagttgcagaccgttacgagatggacgGTCCCCTcgccccct < 1:6162612‑M2/15‑3 (MQ=255) gggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCctt < 1:6797019‑M2/16‑1 (MQ=255) ggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCttt > 1:4574017/1‑50 (MQ=255) ggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCttt > 1:2878841/1‑50 (MQ=255) ggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCttt > 1:3149344/1‑50 (MQ=255) ggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTg < 1:6483234‑M2/17‑1 (MQ=255) gctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTgg < 1:6361173‑M2/18‑1 (MQ=255) gctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTgg > 1:5101695‑M2/33‑50 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:5719534/1‑50 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg < 1:53096/50‑1 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgggg < 1:5681521/50‑1 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:6231619/1‑49 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:2467204/1‑49 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:1109239/1‑49 (MQ=255) caagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGgag < 1:2889995‑M2/22‑1 (MQ=255) caagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGgag < 1:4010717‑M2/22‑1 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgag < 1:7120187/50‑1 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgag < 1:5566535/50‑1 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTATGGGga < 1:1489709/49‑1 (MQ=255) tGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGga > 1:1028225/1‑48 (MQ=255) aagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGga > 1:1604258‑M2/28‑48 (MQ=255) gACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGagag > 1:6838508/1‑50 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag > 1:5113739‑M2/27‑50 (MQ=255) gttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAgg < 1:3579984‑M2/25‑1 (MQ=255) ttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAggg > 1:2772394‑M2/25‑50 (MQ=255) ttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAggg < 1:3311661‑M2/26‑1 (MQ=255) cAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg > 1:2238721/1‑50 (MQ=255) cAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg > 1:4401495/1‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:2282428/1‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:2690932/1‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:2908444/1‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:5279602/1‑50 (MQ=255) gcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGt < 1:1335364‑M2/27‑1 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:4567108‑M2/22‑48 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:5648351‑M2/22‑48 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTa < 1:2051262‑M2/29‑1 (MQ=255) agaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg < 1:6189885‑M2/30‑1 (MQ=255) tCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:430730/1‑50 (MQ=255) cGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg > 1:5732049/1‑50 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAggg < 1:6007109/49‑1 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:3872239/1‑50 (MQ=255) ccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 1:4097267‑M2/33‑1 (MQ=255) cgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTagggc > 1:4455817‑M2/17‑48 (MQ=255) cgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt > 1:3690573‑M2/17‑49 (MQ=255) cgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTg < 1:5159159‑M2/34‑1 (MQ=255) aCAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:3269743/1‑49 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:1199868/1‑48 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:2871902/1‑48 (MQ=255) ttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAg > 1:4955197‑M2/15‑50 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg > 1:3259719/1‑50 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg > 1:1383676/1‑50 (MQ=255) aaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgg > 1:5785773/1‑50 (MQ=255) acgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgg < 1:4408943‑M2/37‑1 (MQ=255) aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg > 1:6832176/1‑50 (MQ=255) aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg < 1:4648063/50‑1 (MQ=255) cgcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAgggg > 1:3477069/1‑49 (MQ=255) gcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:1013059/1‑50 (MQ=255) gcACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:4488668/1‑50 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAca < 1:5595563/50‑1 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAca < 1:5088389/50‑1 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAca < 1:1137213/50‑1 (MQ=255) caATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcag > 1:652785/1‑50 (MQ=255) aaTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:1825123/1‑50 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCa > 1:2497391/1‑50 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCa > 1:4032578/1‑50 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCa > 1:4229845/1‑50 (MQ=255) | ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |