| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 210 [0] | [0] 208 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 192 (1.340) | 80/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 212 total aligned reads displayed.
GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > NC_000913/738963‑739010 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 2:853425/50‑1GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 2:4780029/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 2:2865184/1‑50 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 2:5596837/1‑50 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:3933916/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 2:5181720/1‑50 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA > 1:4821431/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 2:3128409/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 2:3641380/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 2:4763016/50‑1 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 2:1753215/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT < 1:5612633/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT > 1:3555878/1‑50 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT > 2:1683444/1‑50 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC < 1:395303/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:5345224/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 2:1501308/1‑49 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:4470450/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 2:1845709/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 2:1578414/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:3582677/50‑1 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 2:2921829/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:1025589/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 2:3982628/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA < 1:2238121/50‑1 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA < 2:3266257/50‑1 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA > 2:2364136/1‑50 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC < 2:4883786/50‑1 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC < 1:3316922/50‑1 TGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 2:4735390/1‑50 GGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:4233961/1‑49 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 1:1475423/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 2:173825/49‑1 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 2:5332533/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:4626895/1‑50 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC < 1:2204734/50‑1 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC > 2:554536/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:1254400/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 2:1787303/49‑1 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 1:1583528/49‑1 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT < 1:636532/49‑1 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACACCT < 2:4699294/49‑1 TTATTTTTTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 2:1249037/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 2:2039213/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:4848985/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 2:2191844/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:2316599/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:2766263/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:934880/49‑1 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA > 1:1073961/1‑49 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:678959/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 2:1273692/50‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:1858815/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA > 1:4136904/1‑50 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAA < 1:2840272/49‑1 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:3752399/1‑50 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:2931220/1‑50 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 2:2258672/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCG > 1:3002543/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTATAAACC < 2:4288165/49‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:1557631/1‑49 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 2:4868298/49‑1 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 1:2813368/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCA < 1:4796580/50‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTC < 2:1068632/49‑1 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:3091432/1‑50 GAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 2:4537567/1‑49 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:1802204/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 2:3482560/48‑1 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGC < 1:2409645/50‑1 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 2:4994256/1‑49 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 2:366865/1‑49 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:1659265/1‑48 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:780365/1‑50 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:271725/1‑49 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG < 1:515732/49‑1 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGa > 2:4117128/1‑48 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT < 1:5512665/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:5185131/50‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 2:3609066/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT < 2:3369867/50‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGAAAT > 2:617849/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGAAGTAAT < 1:4881384/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:4014768/1‑49 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:945753/1‑49 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 2:4335026/1‑49 ACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG > 1:847192/1‑49 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA < 2:4300247/50‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAA > 1:1975422/1‑50 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 2:2783786/49‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT < 2:445152/50‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:3430206/50‑1 TGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 2:5466666/1‑49 TGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC > 2:3166873/1‑49 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC < 1:4702481/50‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC < 2:249213/50‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:2554677/1‑49 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:5036683/1‑49 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:3675374/1‑49 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > 1:2126911/1‑49 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > NC_000913/738963‑739010 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |