| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 210 [0] | [0] 208 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 192 (1.340) | 80/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 208 total aligned reads displayed.
AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 | aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 2:3128409‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 1:5585759‑M2/1‑1 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac < 2:4763016‑M2/1‑1 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 2:3641380‑M2/50‑50 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg < 2:1753215‑M2/2‑1 (MQ=255) aaggcaactggtgatttttattgattgctgagttttgaatacattgaaCg < 1:2144359‑M2/2‑1 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt > 1:3555878‑M2/48‑50 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt < 1:3947946‑M2/3‑1 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:2828208‑M2/47‑50 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:2234261‑M2/47‑50 (MQ=255) caactggtgatttttattggttgctgagttttgaatacattgaaCGTCTa > 2:5606296‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 2:1925755‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa < 1:4470450‑M2/6‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa < 1:3582677‑M2/6‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:1025589‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa < 2:4884817‑M2/6‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 2:2921829‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa < 2:2303539‑M2/6‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 2:3266257‑M2/8‑1 (MQ=255) ctggtgatttttattgattgctgagttttgaatacattgaaCGTCTacac > 1:2975490‑M2/42‑50 (MQ=255) ctggtgatttttattgattgctgagttttgaatacattgaaCGTCTacac < 1:3316922‑M2/9‑1 (MQ=255) ctggtgatttttattgattgctgagttttgaatacattgaaCGTCTacac < 2:3982210‑M2/9‑1 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 2:4735390‑M2/41‑50 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 1:2863146‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 2:173825‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 2:2203501‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 2:4459887‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:5430726‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa > 1:1475423‑M2/39‑50 (MQ=255) gtgagttttattgattgctgagttttgaatacattgaaCGTCtacaca < 1:2719973‑M2/10‑2 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 2:1688140‑M2/38‑50 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc < 1:666489‑M2/13‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 2:4298906‑M2/38‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 2:5332533‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 2:4228806‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:4626895‑M2/37‑50 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc > 1:5169743‑M2/35‑50 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc > 1:4002173‑M2/35‑50 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc > 2:554536‑M2/35‑50 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 2:1787303‑M2/17‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt < 1:1583528‑M2/17‑1 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 2:4316555‑M2/33‑50 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:1254400‑M2/33‑50 (MQ=255) ttattgattgctgagttttgaatgcattgaaCGTCTACACTTACTCCTg < 2:2418722‑M2/18‑1 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:4848985‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 2:1286081‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:5683061‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 2:1526118‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:2316599‑M2/32‑49 (MQ=255) attgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTa > 2:111608‑M2/30‑49 (MQ=255) attgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTa > 1:1073961‑M2/30‑49 (MQ=255) ttgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTaaa > 1:1858815‑M2/29‑50 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 2:3426213‑M2/28‑50 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:3752399‑M2/28‑50 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 2:4550618‑M2/28‑50 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:2086369‑M2/28‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:5298587‑M2/24‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:5133440‑M2/24‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 2:4080877‑M2/26‑50 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCg > 1:3002543‑M2/26‑50 (MQ=255) ttgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGc > 1:751361‑M2/25‑50 (MQ=255) tgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:2807015‑M2/24‑50 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt < 2:1271724‑M2/27‑1 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:1557631‑M2/23‑49 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 2:279420‑M2/28‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCa < 1:4201347‑M2/29‑1 (MQ=255) tgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 2:711769‑M2/21‑50 (MQ=255) tgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:3091432‑M2/21‑50 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:1883450‑M2/19‑48 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg < 2:3482560‑M2/30‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGa < 1:1802204‑M2/32‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGa < 1:798280‑M2/32‑1 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 2:4994256‑M2/17‑49 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 2:366865‑M2/17‑49 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGc < 1:2409645‑M2/34‑1 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:1659265‑M2/16‑48 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg < 2:4821226‑M2/36‑1 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:271725‑M2/14‑49 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 2:1668361‑M2/13‑49 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 1:4812735‑M2/13‑49 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:4287718‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt < 1:4130969‑M2/40‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 2:3609066‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGAAGTAAt < 1:4881384‑M2/40‑1 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:942278‑M2/41‑1 (MQ=255) acattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGATCAGTAATg > 2:2064573‑M2/9‑49 (MQ=255) attgaaCGTCTACACTTACGCCTGTAAACCGCTCAGGAGCAGTAATGAAt < 1:849940‑M2/44‑1 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc < 2:4881009‑M2/45‑1 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 2:443411‑M2/6‑50 (MQ=255) tgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 2:3166873‑M2/5‑49 (MQ=255) tgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 2:5466666‑M2/5‑49 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:3435708‑M2/46‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:5036683‑M2/3‑49 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:3675374‑M2/3‑49 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:2554677‑M2/3‑49 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa < 2:1027746‑M2/47‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc < 1:4702481‑M2/48‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc < 2:249213‑M2/48‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 2:5055202/50‑1 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa > 2:270048/1‑50 (MQ=255) | AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |