| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 139 [0] | [0] 138 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 137 (0.920) | 69/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 137 total aligned reads displayed.
TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236718‑2236765 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:4129973/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:143064/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 2:4040552/1‑50TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 2:2270283/1‑50TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:2839385/50‑1 AATTCAAATTGGTCCGCTCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:5143973/1‑49 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 2:5513901/1‑49 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 2:1158167/50‑1 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 2:1505576/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 2:2820451/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 2:5405763/50‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC < 2:4932846/50‑1 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC > 1:5667113/1‑50 TTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGAC > 2:3108904/1‑50 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC < 1:2619402/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGA < 1:3702025/50‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:1050629/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 2:5064424/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:2897666/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:17331/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTAGATTATTGACCG > 2:3968746/1‑49 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 2:3602491/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:1776102/50‑1 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 2:2062243/1‑50 TGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC > 2:2608060/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 2:3209970/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 2:359630/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 2:1599711/49‑1 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 2:4511237/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGG < 1:2693468/50‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG < 1:5340514/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 2:3388301/1‑49 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA > 2:2132886/1‑50 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:3583687/1‑50 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:4588084/1‑50 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 2:662686/1‑50 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 2:1582903/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 2:2904127/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 2:4454334/1‑49 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 2:2259098/1‑49 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA < 1:5606215/50‑1 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:3999861/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 2:2497078/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 2:618787/1‑50 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 2:408190/1‑49 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:4506208/1‑49 TCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACA > 2:5336135/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:2995344/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT < 2:5100000/50‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 2:3460077/50‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTC < 1:2387893/50‑1 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:27917/1‑49 GCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCA < 2:1321682/50‑1 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:4397562/50‑1 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:4901585/50‑1 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA < 2:265400/50‑1 GCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACA > 2:337054/1‑50 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:987942/1‑49 ACGTCCCAATGGCCTGGATTATTGACCGAATGCGGCCCATATTCACATCA > 2:411170/1‑50 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT > 2:1157938/1‑50 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT > 1:5625460/1‑50 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT < 1:3147507/50‑1 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT < 1:1405255/50‑1 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT > 2:2177189/1‑50 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:854686/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 2:3865553/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:2415414/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT < 1:3003959/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:665494/1‑50 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:5628913/1‑50 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:1926009/1‑50 gCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 1:3232993/49‑1 TCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTT < 2:2026802/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 2:4989435/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT < 1:5088798/50‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:3924441/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:5386572/49‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:3838245/49‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 2:1103738/1‑49 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 2:1289118/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA > 1:1356556/1‑50 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:1981899/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 2:3637444/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC > 1:1163914/1‑50 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG > 1:766251/1‑50 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 2:3077763/49‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 1:1255581/49‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC < 1:1974792/50‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC > 1:3297/1‑50 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:5607763/1‑50 GGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA > 1:5258906/1‑50 GGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA > 1:1608222/1‑50 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT < 1:84316/50‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTA < 1:22007/49‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 1:1599885/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 2:4436086/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 2:1189681/50‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC < 1:1647132/49‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC < 2:5112238/49‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 2:1492514/49‑1 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA > NC_000913/2236718‑2236765 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |