| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 139 [0] | [0] 138 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 137 (0.920) | 69/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 138 total aligned reads displayed.
CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGT > NC_000913/2236669‑2236767 | taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 2:2270283‑M2/50‑50 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:143064‑M2/1‑1 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 1:2839385‑M2/1‑1 (MQ=255)taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt < 2:2442970‑M2/1‑1 (MQ=255) aattcaaattggtccgctccggcgcaacgtcccaatggcctggattatt > 1:5143973‑M2/49‑49 (MQ=255) aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt > 2:5513901‑M2/49‑49 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa < 2:1158167‑M2/3‑1 (MQ=255) attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa > 2:1505576‑M2/48‑50 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc > 1:5667113‑M2/47‑50 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 2:4932846‑M2/4‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 1:820845‑M2/4‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc < 2:5405763‑M2/4‑1 (MQ=255) ttcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAc > 2:3108904‑M2/47‑50 (MQ=255) caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc < 1:2619402‑M2/5‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 2:217242‑M2/44‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg < 1:2897666‑M2/6‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 2:2908786‑M2/44‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg < 1:1050629‑M2/6‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg > 1:17331‑M2/44‑49 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGa < 1:3702025‑M2/7‑1 (MQ=255) aaattggtccgatccggcgcaacgtcccaatggcctagattatTGACCg > 2:3968746‑M2/44‑49 (MQ=255) aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa < 2:2765891‑M2/8‑1 (MQ=255) attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt < 2:3602491‑M2/9‑1 (MQ=255) ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg < 1:1776102‑M2/10‑1 (MQ=255) tggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc > 2:2608060‑M2/40‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 2:4511237‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 1:3188059‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 2:4006753‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 2:1599711‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc < 1:5356423‑M2/11‑1 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:390784‑M2/39‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 2:3209970‑M2/39‑50 (MQ=255) ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 2:359630‑M2/39‑50 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCgg < 1:2693468‑M2/13‑1 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 1:5666139‑M2/38‑49 (MQ=255) gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg > 2:3388301‑M2/38‑49 (MQ=255) tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa > 2:2132886‑M2/37‑50 (MQ=255) ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 2:662686‑M2/36‑50 (MQ=255) ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 1:2545768‑M2/36‑50 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 2:2259098‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 2:2904127‑M2/35‑49 (MQ=255) cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc > 2:4454334‑M2/35‑49 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 2:618787‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:3999861‑M2/34‑50 (MQ=255) gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 2:129626‑M2/34‑50 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 1:4506208‑M2/33‑49 (MQ=255) atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca > 2:408190‑M2/33‑49 (MQ=255) tccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACcaca > 2:5336135‑M2/32‑50 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt < 1:4703137‑M2/21‑1 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:561425‑M2/30‑50 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt < 2:5100000‑M2/21‑1 (MQ=255) cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:2995344‑M2/30‑50 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt > 1:27917‑M2/29‑49 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTc < 2:3460077‑M2/22‑1 (MQ=255) ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTc < 1:2387893‑M2/22‑1 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:4397562‑M2/24‑1 (MQ=255) cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac < 1:4901585‑M2/24‑1 (MQ=255) gcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcaca < 2:265400‑M2/25‑1 (MQ=255) caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 2:1569846‑M2/25‑50 (MQ=255) aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat > 1:987942‑M2/24‑49 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGTCCACATTCAcatca > 1:4290098‑M2/23‑50 (MQ=255) acgtcccaatggcctggattatTGACCGAATGCGGCCCATATTCAcatca > 2:411170‑M2/23‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat > 2:1157938‑M2/22‑50 (MQ=255) cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat < 1:1405255‑M2/29‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt < 2:3865553‑M2/30‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt < 1:854686‑M2/30‑1 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:1926009‑M2/21‑50 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt > 1:5628913‑M2/21‑50 (MQ=255) gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt < 1:3003959‑M2/30‑1 (MQ=255) tcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt < 2:2026802‑M2/31‑1 (MQ=255) gcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAttt < 1:3232993‑M2/31‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc < 1:5386572‑M2/32‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt < 2:4989435‑M2/33‑1 (MQ=255) ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt > 1:3924441‑M2/18‑50 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa > 1:1356556‑M2/16‑50 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa < 2:1289118‑M2/35‑1 (MQ=255) aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCGTa < 1:5095070‑M2/35‑1 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc > 1:1163914‑M2/15‑50 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 1:1981899‑M2/36‑1 (MQ=255) atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc < 2:3637444‑M2/36‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg < 1:366255‑M2/37‑1 (MQ=255) tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg > 1:766251‑M2/14‑50 (MQ=255) gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgc < 1:1255581‑M2/38‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc < 2:1048467‑M2/40‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc > 2:2054373‑M2/11‑50 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc < 1:1974792‑M2/40‑1 (MQ=255) cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc > 1:3297‑M2/11‑50 (MQ=255) ctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg > 1:5607763‑M2/10‑50 (MQ=255) ggattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa > 1:5258906‑M2/8‑50 (MQ=255) ggattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa > 1:1608222‑M2/8‑50 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGt < 1:1685190‑M2/42‑1 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa < 1:22007‑M2/43‑1 (MQ=255) gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTa < 2:3274347‑M2/43‑1 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTatg < 2:11671‑M2/45‑2 (MQ=255) attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt < 1:1599885‑M2/45‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt < 2:4436086‑M2/46‑1 (MQ=255) ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt > 2:5021105‑M2/5‑50 (MQ=255) atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTc < 2:5112238‑M2/47‑1 (MQ=255) tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa < 2:1492514‑M2/48‑1 (MQ=255) tGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGt > 1:5567533/1‑50 (MQ=255) | CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGT > NC_000913/2236669‑2236767 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |