| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,090,347 | Δ708 bp | coding (1‑708/708 nt) | endA → | DNA‑specific endonuclease I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3090347 | 3091054 | 708 | 139 [0] | [0] 142 | endA | DNA‑specific endonuclease I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090346 | 0 (0.000) | 137 (0.920) | 71/98 | 0.0 | 100% | intergenic (+94/‑1) | yggI/endA | conserved protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3091055 = | 0 (0.000) | intergenic (+1/‑79) | endA/rsmE | DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase | |||||
Only 100 of 137 total aligned reads displayed.
CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > NC_000913/3091055‑3091103 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGC < 2:4622908/50‑1 CAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 2:3181148/1‑50 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCT < 1:531363/50‑1 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 1:3789538/1‑49 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 2:3960345/1‑50 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA < 2:12673/50‑1 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 2:3395769/1‑50 AAACAGCTTTCGCTAAGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA < 2:3350892/50‑1 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA < 1:3257777/50‑1 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 1:3228410/1‑50 CAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC < 1:1662815/50‑1 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACAC > 1:3180606/1‑49 GCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTA < 2:2794667/50‑1 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG < 2:4060706/50‑1 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG > 2:2315248/1‑50 TTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC > 1:3167911/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 2:4260234/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 1:2592013/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 2:298834/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 1:3876284/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 2:3478700/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 2:5688786/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC < 2:3665426/48‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC < 2:2200956/48‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC < 1:2319604/48‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 2:4105568/1‑49 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG < 1:2429338/49‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG < 1:2185995/49‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 1:4850330/1‑49 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 2:1876645/50‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 1:3568706/50‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 2:5622295/50‑1 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT < 1:1133272/50‑1 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT > 1:930610/1‑50 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT < 1:4440667/50‑1 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 2:2615873/1‑50 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 1:4794230/1‑50 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 1:2258717/1‑50 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT < 1:3052868/48‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT < 2:3020698/48‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCct < 2:818364/50‑3 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:3075149/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT < 1:1883063/50‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT < 1:2176641/50‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:3140829/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT < 1:5420618/50‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 2:3837494/1‑50 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 1:5258940/50‑1 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT > 1:3271628/1‑50 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 2:530817/50‑1 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 2:3645585/50‑1 TGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT > 1:312371/1‑50 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 2:3631872/49‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 1:4669127/49‑1 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 2:3303210/49‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTG > 1:5525720/1‑50 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTG < 2:3331559/50‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT < 1:1261576/49‑1 CTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTT < 2:4947243/49‑1 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:5699814/1‑50 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:3619764/1‑50 GGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 2:1561932/1‑49 GGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 2:1861735/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 1:3836692/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 2:4081651/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT < 1:4438878/49‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT < 2:1176794/48‑1 GCTCGTTGTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT < 2:1120137/49‑1 CTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAA > 2:1756404/1‑50 CTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAA < 2:5226070/50‑1 CTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAA > 1:2679297/1‑50 CTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAA < 1:3971591/50‑1 TCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAAC > 1:2475205/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:789785/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:2921189/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACC < 1:1980227/49‑1 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAAC < 2:1551957/48‑1 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 2:5416047/1‑50 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC < 2:5058760/50‑1 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA > 1:1866004/1‑50 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA > 1:2849065/1‑50 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCT < 1:4314594/49‑1 AACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC > 2:1442364/1‑50 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC < 2:5071057/50‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC < 2:5554640/49‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC < 1:4292936/49‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC < 1:3365967/49‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC < 1:1592089/49‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC > 1:4978906/1‑49 CACGGAG‑AAGTGACTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 1:3028711/50‑1 ACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCA < 2:902642/50‑1 agAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG > 2:5617527/3‑50 agAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG > 2:257080/3‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 1:4646720/1‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA < 1:4703020/50‑1 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA < 1:5483558/50‑1 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 2:3791298/1‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 2:1372914/1‑50 AGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC < 2:1877580/50‑1 AGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 2:701888/1‑49 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > NC_000913/3091055‑3091103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |