| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,320,144 | Δ16,489 bp | [atoS]–[yfaA] | [atoS], atoC, atoD, atoA, atoE, atoB, yfaP, yfaQ, yfaS, yfaT, [yfaA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2320144 | 2336632 | 16489 | 26 [0] | [0] 26 | [atoS]–[yfaA] | [atoS],atoC,atoD,atoA,atoE,atoB,yfaP,yfaQ,yfaS,yfaT,[yfaA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2320143 | 0 (0.000) | 25 (0.850) | 23/96 | 0.1 | 100% | coding (101/1827 nt) | atoS | sensory histidine kinase AtoS |
| ? | NC_000913 | 2336633 = | 0 (0.000) | coding (12/1689 nt) | yfaA | DUF2138 domain‑containing protein YfaA | |||||
TGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAAAAAA > NC_000913/2320095‑2320192 | tGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATt > 1:1030964‑M1/1‑49 (MQ=255) aTGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttc < 1:122991‑M1/50‑4 (MQ=255) tGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttca < 1:502499‑M1/50‑5 (MQ=255) cAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcacca < 1:927711‑M1/50‑8 (MQ=255) aTCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccact > 1:1241145‑M1/1‑41 (MQ=255) aTCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccact < 1:898545‑M1/50‑10 (MQ=255) aTGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgc > 1:1410805‑M1/1‑35 (MQ=255) tGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgc > 1:1044494‑M1/1‑34 (MQ=255) cATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccacat > 1:1238198‑M1/1‑30 (MQ=255) aTTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccacatt < 1:350851‑M1/50‑22 (MQ=255) aTTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccacatt > 1:1937373‑M1/1‑29 (MQ=255) aTTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccacat < 1:1832855‑M1/49‑21 (MQ=255) gTCCCAACGCTTACTATTGGTTATATttcaccactcattgccacattcct > 1:1336708‑M1/1‑26 (MQ=255) aaCGCTTACTATTGGTTATATttcaccactcattgccacattccttgtgt < 1:773619‑M1/50‑30 (MQ=255) gCTTACTATTGGTTATATttcaccactcattgccacattccttgtgtata < 1:1910261‑M1/50‑33 (MQ=255) gCTTACTATTGGTTATATttcaccactcattgccacattccttgtgtata < 1:873405‑M1/50‑33 (MQ=255) tACTATTGGTTATATttcaccactcattgccacattccttgtgtatagc > 1:1487532‑M1/1‑15 (MQ=255) tATTGGTTATATttcaccactcattgccacattccttgtgtatagccagc > 1:1511780‑M1/1‑12 (MQ=255) tATTGGTTATATttcaccactcattgccacattccttgtgtatagccagc > 1:841343‑M1/1‑12 (MQ=255) ttGGTTATATttcaccactcattgccacattccttgtgtatagccagcca < 1:931153‑M1/50‑41 (MQ=255) tGGTTATATttcaccactcattgccacattccttgtgtatagccagccat > 1:1750810‑M1/1‑9 (MQ=255) ttATATttcaccactcattgccacattccttgtgtatagccagccatttt > 1:1950463‑M1/1‑6 (MQ=255) ttATATttcaccactcattgccacattccttgtgtatagccagccatttt < 1:1341727‑M1/50‑45 (MQ=255) atatttcaccactcattgccacattccttgtgtatagccagccattttt > 1:975877‑M1/1‑4 (MQ=255) tatttcaccactcattgccacattccttgtgtatagccagccatttttt < 1:1119916‑M1/49‑47 (MQ=255) tttcaccactcattgccacattccttgtgtatagccagccattttttacg > 1:1789034‑M1/1‑1 (MQ=255) | TGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAAAAAA > NC_000913/2320095‑2320192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |