| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 56 [0] | [0] 55 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 55 (1.470) | 39/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > NC_000913/2614796‑2614842 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:2015244/1‑49TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC > 1:2321265/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCG > 1:424324/1‑49 TATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACC < 1:2798934/48‑1 GCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAA > 1:2160866/1‑49 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACA < 1:2248345/50‑1 CAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAAC < 1:1079576/49‑1 ATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGT > 1:78568/1‑50 TATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTT < 1:1487484/50‑1 ATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:2109829/1‑50 ATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTC > 1:2414377/1‑50 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACTGAAACAGTTC < 1:1540725/49‑1 TGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCG > 1:724585/1‑50 GAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGT > 1:2484198/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:1622399/1‑50 AAATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTC > 1:2037963/1‑50 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG > 1:1399945/1‑50 AATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCG > 1:1385350/1‑50 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:2624204/1‑50 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:699787/1‑50 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:2298938/1‑50 ATGCAATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGG > 1:1291133/1‑50 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG < 1:725191/50‑1 AATGTTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCT > 1:884029/1‑49 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:2706570/1‑46 TTTCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTG > 1:592830/1‑46 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:2701440/1‑49 TCATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGAT > 1:2740154/1‑49 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:377159/1‑50 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA > 1:2002301/1‑50 CATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATT < 1:1952556/49‑1 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTAT > 1:101999/1‑50 ATATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTA < 1:1258291/49‑1 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT < 1:757896/50‑1 TATCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATT < 1:367150/50‑1 TCATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCT < 1:1804119/50‑1 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:1095704/1‑50 CATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT > 1:2160359/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG > 1:1340975/1‑50 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTG < 1:2673853/50‑1 ATTTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTT < 1:649119/49‑1 TTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG > 1:1821364/1‑50 TTTCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCG > 1:2376762/1‑50 TCAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGC < 1:2727779/49‑1 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCG < 1:191772/49‑1 CAAGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCG < 1:2361554/49‑1 AGGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATT < 1:2614369/50‑1 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT > 1:1928319/1‑50 GGAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTT < 1:2112504/50‑1 GAGCCGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTG > 1:2650098/1‑50 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA < 1:2231784/50‑1 CGACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCA < 1:958813/50‑1 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT < 1:545571/50‑1 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT < 1:2191574/50‑1 GACCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCACGATTTGCCCAT > 1:1908459/1‑50 TTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2601153‑2601200‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > NC_000913/2614796‑2614842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |