| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 56 [0] | [0] 55 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 55 (1.470) | 39/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
GTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > NC_000913/2614748‑2614842 | ttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 1:2015244‑M2/49‑49 (MQ=255)ttatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc > 1:2321265‑M2/49‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgaccg > 1:424324‑M2/48‑49 (MQ=255) tatgcaatatgaaatgcaatgtttcatatcattttcaaggagccgacc < 1:2798934‑M2/1‑1 (MQ=255) gcaatatgaaatgcaatgtttcatatcattttcaaggagccgacCGaaa > 1:2160866‑M2/45‑49 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAAc < 1:1079576‑M2/6‑1 (MQ=255) caatatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACa < 1:2248345‑M2/7‑1 (MQ=255) atatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGt > 1:78568‑M2/42‑50 (MQ=255) tatgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGtt < 1:1487484‑M2/10‑1 (MQ=255) atgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc > 1:2109829‑M2/40‑50 (MQ=255) atgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtc > 1:2414377‑M2/40‑50 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacTGAAACAGTtc < 1:1540725‑M2/11‑1 (MQ=255) tgaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcg > 1:724585‑M2/39‑50 (MQ=255) gaaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgt > 1:2484198‑M2/38‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc > 1:1622399‑M2/37‑50 (MQ=255) aaatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtc > 1:2037963‑M2/37‑50 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg > 1:1399945‑M2/36‑50 (MQ=255) aatgcaatgtttcatatcattttcaaggagccgacCGAAACAGTtcgtcg > 1:1385350‑M2/36‑50 (MQ=255) atgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCgg > 1:2624204‑M2/35‑50 (MQ=255) atgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCgg > 1:699787‑M2/35‑50 (MQ=255) atgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCgg > 1:2298938‑M2/35‑50 (MQ=255) atgcaatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCgg > 1:1291133‑M2/35‑50 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCt > 1:884029‑M2/31‑49 (MQ=255) aatgtttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg < 1:725191‑M2/20‑1 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:2706570‑M2/27‑46 (MQ=255) tttcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTg > 1:592830‑M2/27‑46 (MQ=255) tcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:2701440‑M2/25‑49 (MQ=255) tcatatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGat > 1:2740154‑M2/25‑49 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta > 1:377159‑M2/24‑50 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta > 1:2002301‑M2/24‑50 (MQ=255) catatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatt < 1:1952556‑M2/26‑1 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattat > 1:101999‑M2/23‑50 (MQ=255) atatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGatta < 1:1258291‑M2/27‑1 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt < 1:757896‑M2/29‑1 (MQ=255) tatcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGattatt < 1:367150‑M2/29‑1 (MQ=255) tcattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCt < 1:1804119‑M2/31‑1 (MQ=255) cattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCtt > 1:1095704‑M2/19‑50 (MQ=255) cattttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCtt > 1:2160359‑M2/19‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCtt < 1:649119‑M2/32‑1 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg > 1:1340975‑M2/18‑50 (MQ=255) attttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTg < 1:2673853‑M2/33‑1 (MQ=255) tttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg > 1:1821364‑M2/16‑50 (MQ=255) tttcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcg > 1:2376762‑M2/16‑50 (MQ=255) tcaaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTgcgc < 1:2727779‑M2/36‑1 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGcgcg < 1:191772‑M2/37‑1 (MQ=255) caaggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGcgcg < 1:2361554‑M2/37‑1 (MQ=255) aggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAtt < 1:2614369‑M2/40‑1 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt > 1:1928319‑M2/10‑50 (MQ=255) ggagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGAttt < 1:2112504‑M2/41‑1 (MQ=255) gagccgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTg > 1:2650098‑M2/9‑50 (MQ=255) cgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCa < 1:2231784‑M2/46‑1 (MQ=255) cgacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCa < 1:958813‑M2/46‑1 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt < 1:545571‑M2/47‑1 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAt < 1:2191574‑M2/47‑1 (MQ=255) gacCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCACGATTTGCCCAt > 1:1908459‑M2/4‑50 (MQ=255) | GTTATCGGGCTATTTATTTACGTCAGGAACCCTGAAAAATCAGCCCGGCGAAACAGTTCGTCGGGCTGAAGATTATTCTTGCGCGATTTGCCCAT > NC_000913/2614748‑2614842 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |