| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 48 [0] | [0] 51 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 48 (1.580) | 42/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > NC_000913/399806‑399851 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTG < 1:499936/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:2106533/1‑50 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:2063767/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:2255480/49‑1 ATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGA < 1:2607889/49‑1 TAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAA > 1:305744/1‑49 AGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA > 1:1184467/1‑50 GAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATA < 1:2644294/49‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:850569/50‑1 AAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATT < 1:746279/50‑1 AACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTA > 1:427265/1‑50 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:2439819/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG < 1:366025/50‑1 AGCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCG > 1:2211946/1‑50 GCAATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGG > 1:2036241/1‑50 AATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGC < 1:538114/50‑1 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:270801/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG > 1:543475/1‑50 ATAATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCG < 1:942825/50‑1 ATTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA < 1:379925/50‑1 TTTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTA > 1:2539647/1‑49 TTTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAA > 1:888088/1‑49 TTATATTCACTGAAAATATTTTTAATCTTGAATATTGTCGGGCGTTAAAA > 1:1044471/1‑50 TTATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAA < 1:684352/49‑1 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATA > 1:1279329/1‑50 ATATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAAT < 1:582494/49‑1 TATTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATAT > 1:520838/1‑50 TTCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATT < 1:1538132/49‑1 TCACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTA > 1:2558072/1‑49 ACTGAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACAT > 1:1597887/1‑50 GAAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGT > 1:1353864/1‑50 AAAATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTG > 1:1179766/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT > 1:854411/1‑50 ATATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTT < 1:1064033/50‑1 TATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTT < 1:2303259/50‑1 ATTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:1101872/1‑50 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTC < 1:1647042/50‑1 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT > 1:964065/1‑49 TTTTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTT < 1:1650184/49‑1 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA > 1:734475/1‑50 TTTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCA < 1:654456/49‑1 TTAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAA < 1:2456554/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:1493844/49‑1 TAATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAT < 1:1061396/49‑1 AATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGC > 1:2622717/1‑50 ATCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCG < 1:2137610/50‑1 TCTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:2050696/1‑50 CTTGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > 1:2268651/1‑49 AATAGAAACAGCAATAATTTTATATTCACTGAAAATATTTTTAATCTT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/389850‑389897‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGT > NC_000913/399806‑399851 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |