| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 389,898 | Δ9,908 bp | yaiT–[yaiZ] | yaiT, insF‑2, insE‑2, yaiT, iprA, ampH, sbmA, yaiW, yaiY, [yaiZ] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 389898 | 399805 | 9908 | 48 [0] | [0] 51 | yaiT–[yaiZ] | yaiT,insF‑2,insE‑2,yaiT,iprA,ampH,sbmA,yaiW,yaiY,[yaiZ] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 389897 | 0 (0.000) | 48 (1.580) | 42/98 | 0.0 | 100% | intergenic (‑170/‑354) | hemB/yaiT | porphobilinogen synthase/putative autotransporter YaiT |
| ? | NC_000913 | 399806 = | 0 (0.000) | intergenic (+1/+23) | yaiZ/ddlA | DUF2754 domain‑containing protein YaiZ/D‑alanine‑‑D‑alanine ligase A | |||||
GGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399758‑399854 | aatagaaacagcaataattttatattcactgaaaatatttttaatcttg < 1:499936‑M2/1‑1 (MQ=255) atagaaacagcaataattttatattcactgaaaatatttttaatcttGaa > 1:2106533‑M2/48‑50 (MQ=255) atagaaacagcaataattttatattcactgaaaatatttttaatcttGa < 1:2607889‑M2/2‑1 (MQ=255) atagaaacagcaataattttatattcactgaaaatatttttaatcttGa < 1:2255480‑M2/2‑1 (MQ=255) atagaaacagcaataattttatattcactgaaaatatttttaatcttGa < 1:2063767‑M2/2‑1 (MQ=255) tagaaacagcaataattttatattcactgaaaatatttttaatcttGaa > 1:305744‑M2/47‑49 (MQ=255) agaaacagcaataattttatattcactgaaaatatttttaatcttGAata > 1:1184467‑M2/46‑50 (MQ=255) gaaacagcaataattttatattcactgaaaatatttttaatcttGAata < 1:2644294‑M2/5‑1 (MQ=255) aaacagcaataattttatattcactgaaaatatttttaatcttGAAtatt < 1:746279‑M2/7‑1 (MQ=255) aaacagcaataattttatattcactgaaaatatttttaatcttGAAtatt < 1:850569‑M2/7‑1 (MQ=255) aacagcaataattttatattcactgaaaatatttttaatcttGAAtatta > 1:427265‑M2/43‑50 (MQ=255) agcaataattttatattcactgaaaatatttttaatcttGAATATTATCg < 1:366025‑M2/11‑1 (MQ=255) agcaataattttatattcactgaaaatatttttaatcttGAATATTATCg < 1:2439819‑M2/11‑1 (MQ=255) agcaataattttatattcactgaaaatatttttaatcttGAATATTATCg > 1:2211946‑M2/40‑50 (MQ=255) gcaataattttatattcactgaaaatatttttaatcttGAATATTATCgg > 1:2036241‑M2/39‑50 (MQ=255) aataattttatattcactgaaaatatttttaatcttGAATATTATCGGGc < 1:538114‑M2/14‑1 (MQ=255) ataattttatattcactgaaaatatttttaatcttGAATATTATCGGGCg < 1:942825‑M2/15‑1 (MQ=255) ataattttatattcactgaaaatatttttaatcttGAATATTATCGGGCg > 1:543475‑M2/36‑50 (MQ=255) ataattttatattcactgaaaatatttttaatcttGAATATTATCGGGCg > 1:270801‑M2/36‑50 (MQ=255) attttatattcactgaaaatatttttaatcttGAATATTATCGGGCGTTa < 1:379925‑M2/18‑1 (MQ=255) ttttatattcactgaaaatatttttaatcttGAATATTATCGGGCGTTa > 1:2539647‑M2/32‑49 (MQ=255) tttatattcactgaaaatatttttaatcttGAATATTATCGGGCGTTaa > 1:888088‑M2/31‑49 (MQ=255) ttatattcactgaaaatatttttaatcttGAATATTGTCGGGCGTTaaaa > 1:1044471‑M2/30‑50 (MQ=255) ttatattcactgaaaatatttttaatcttGAATATTATCGGGCGTTaaa < 1:684352‑M2/20‑1 (MQ=255) atattcactgaaaatatttttaatcttGAATATTATCGGGCGTTAAAata > 1:1279329‑M2/28‑50 (MQ=255) atattcactgaaaatatttttaatcttGAATATTATCGGGCGTTAAAat < 1:582494‑M2/22‑1 (MQ=255) tattcactgaaaatatttttaatcttGAATATTATCGGGCGTTAAAatat > 1:520838‑M2/27‑50 (MQ=255) ttcactgaaaatatttttaatcttGAATATTATCGGGCGTTAAAATAtt < 1:1538132‑M2/25‑1 (MQ=255) tcactgaaaatatttttaatcttGAATATTATCGGGCGTTAAAATATTa > 1:2558072‑M2/24‑49 (MQ=255) actgaaaatatttttaatcttGAATATTATCGGGCGTTAAAATATTACAt > 1:1597887‑M2/22‑50 (MQ=255) gaaaatatttttaatcttGAATATTATCGGGCGTTAAAATATTACATtgt > 1:1353864‑M2/19‑50 (MQ=255) aaaatatttttaatcttGAATATTATCGGGCGTTAAAATATTACATtgtg > 1:1179766‑M2/18‑50 (MQ=255) atatttttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGtt < 1:1064033‑M2/36‑1 (MQ=255) atatttttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGtt > 1:854411‑M2/15‑50 (MQ=255) tatttttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGttt < 1:2303259‑M2/37‑1 (MQ=255) atttttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGtttt > 1:1101872‑M2/13‑50 (MQ=255) tttttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGtttt > 1:964065‑M2/12‑49 (MQ=255) tttttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGtttt < 1:1650184‑M2/38‑1 (MQ=255) tttttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTc < 1:1647042‑M2/39‑1 (MQ=255) tttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCaa > 1:734475‑M2/10‑50 (MQ=255) tttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCa < 1:654456‑M2/40‑1 (MQ=255) ttaatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCaa < 1:2456554‑M2/41‑1 (MQ=255) taatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAt < 1:1493844‑M2/42‑1 (MQ=255) taatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAAt < 1:1061396‑M2/42‑1 (MQ=255) aatcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGc > 1:2622717‑M2/7‑50 (MQ=255) atcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCg < 1:2137610‑M2/45‑1 (MQ=255) tcttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGt > 1:2050696‑M2/5‑50 (MQ=255) cttGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGt > 1:2268651‑M2/4‑49 (MQ=255) gAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGtt < 1:1973028/47‑1 (MQ=255) gAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGt < 1:1499404/46‑1 (MQ=255) gAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAt < 1:1601107/49‑1 (MQ=255) | GGGTTGATTATTCGTCGTCGCGATGAAGAAACTGAAAACGCCCAATAAGAATATTATCGGGCGTTAAAATATTACATTGTGGTTTTCAATGCGTTAT > NC_000913/399758‑399854 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |