| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,601,201 | Δ13,595 bp | [hyfA]–focB | [hyfA], hyfB, hyfC, hyfD, hyfE, hyfF, hyfG, hyfH, hyfI, hyfJ, hyfR, focB | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2601201 | 2614795 | 13595 | 39 [0] | [0] 37 | [hyfA]–focB | [hyfA],hyfB,hyfC,hyfD,hyfE,hyfF,hyfG,hyfH,hyfI,hyfJ,hyfR,focB |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2601200 | 0 (0.000) | 37 (1.220) | 30/98 | 0.0 | 100% | intergenic (+252/‑1) | bcp/hyfA | thiol peroxidase/hydrogenase 4 component A |
| ? | NC_000913 | 2614796 = | 0 (0.000) | intergenic (+14/+24) | focB/yfgO | putative formate transporter/putative transporter YfgO | |||||
CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAA > NC_000913/2601151‑2601247 | cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc < 1:292544/50‑1 (MQ=255)cTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGAc > 1:1615085/1‑50 (MQ=255) ttATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACc > 1:1511350‑M1/1‑48 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:773543‑M1/1‑45 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaa > 1:276024‑M1/1‑45 (MQ=255) tGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaa < 1:244345‑M1/49‑5 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:2028163‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:915090‑M1/1‑41 (MQ=255) atatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagt > 1:172596‑M1/1‑41 (MQ=255) tatGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagtt < 1:528470‑M1/50‑11 (MQ=255) atGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttc > 1:1265728‑M1/1‑39 (MQ=255) tGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcg > 1:1522985‑M1/1‑38 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc < 1:2447302‑M1/50‑15 (MQ=255) aaaTGCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtc > 1:556824‑M1/1‑36 (MQ=255) gCAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggc > 1:1478154‑M1/1‑32 (MQ=255) cAATGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggct > 1:1270204‑M1/1‑31 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:620399‑M1/50‑21 (MQ=255) aaTGTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg < 1:334548‑M1/50‑21 (MQ=255) gTTTCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctg > 1:789193‑M1/1‑27 (MQ=255) tttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaag < 1:2624186‑M1/49‑24 (MQ=255) ttCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:793432‑M1/1‑25 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat > 1:2318629‑M1/1‑24 (MQ=255) tCATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagat < 1:1667147‑M1/49‑26 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta > 1:203557‑M1/1‑23 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta > 1:2230034‑M1/1‑23 (MQ=255) cATATCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta > 1:109079‑M1/1‑23 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat > 1:1088880‑M1/1‑22 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattat < 1:1412824‑M1/50‑29 (MQ=255) atatCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagatta < 1:2228401‑M1/49‑28 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:1732814‑M1/1‑20 (MQ=255) atCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattc > 1:1055361‑M1/1‑20 (MQ=255) tCATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattct > 1:996895‑M1/1‑19 (MQ=255) cATTTTCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattctt > 1:2011730‑M1/1‑18 (MQ=255) ttttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgc < 1:2007116‑M1/50‑35 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc > 1:425735‑M1/1‑14 (MQ=255) ttCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcg < 1:1869883‑M1/49‑36 (MQ=255) tCAAGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgc < 1:2461392‑M1/49‑37 (MQ=255) aGGAGCCGACcgaaacagttcgtcgggctgaagattattcttgcgcgatt > 1:582293‑M1/1‑10 (MQ=255) gaccgaaacagttcgtcgggctgaagattattcttgcgcgatttgcccat < 1:228983‑M1/50‑48 (MQ=255) | CTTTATGCAATATGAAATGCAATGTTTCATATCATTTTCAAGGAGCCGACATGAACCGCTTTGTGGTGGCCGAACCACTGTGGTGTACAGGATGTAA > NC_000913/2601151‑2601247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |