| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 20 (0.950) +CGAGATGGACG |
17/76 | 0.1 | 63.4% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 30 (1.090) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380066‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGG > NC_000913/624576‑624612 ||||||||||| GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAG < 1:1805769/50‑1 TCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATG > 1:299309/1‑50 AGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGA > 1:1360424/1‑50 GAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGAC < 1:695235/50‑1 ATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGG > 1:1512139/1‑50 TCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCC > 1:1713311/1‑50 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCC < 1:2329682/50‑1 CAGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCC < 1:1334832/49‑1 AGGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCT > 1:269085/1‑50 GGTCAGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTC < 1:603963/50‑1 AGACGGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCC < 1:533001/50‑1 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:1797286/50‑1 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT < 1:774621/50‑1 GGGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTT > 1:396766/1‑50 GGCTGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTG > 1:1194805/1‑50 TGCAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:619021/1‑49 CAAGTTGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGG > 1:2338924/1‑47 TGCAGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGT > 1:174048/1‑50 AGACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAG > 1:222185/1‑50 ACCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGG < 1:1806552/50‑1 CCGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGT < 1:89375/50‑1 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTG < 1:2059308/50‑1 CGTTACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGT > 1:2200908/1‑49 TACGAGATGGACGGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAGG > 1:165572/1‑50 ||||||||||| GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/380066‑380111‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGG > NC_000913/624576‑624612 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |