| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 20 (0.950) +CGAGATGGACG |
17/76 | 0.1 | 63.4% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 30 (1.090) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCAGCCCG > NC_000913/380066‑380159 | gAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgag < 1:1805769‑M1/50‑5 (MQ=255) tCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatg > 1:299309‑M1/1‑43 (MQ=255) aGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatgga > 1:1360424‑M1/1‑41 (MQ=255) gAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggac < 1:695235‑M1/50‑11 (MQ=255) aTTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacgg > 1:1512139‑M1/1‑38 (MQ=255) tCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtcc > 1:1713311‑M1/1‑35 (MQ=255) cAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtcccc < 1:2329682‑M1/50‑18 (MQ=255) cAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtccc < 1:1334832‑M1/49‑17 (MQ=255) aGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtcccct > 1:269085‑M1/1‑32 (MQ=255) ggTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctc < 1:603963‑M1/50‑20 (MQ=255) aGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgccc < 1:533001‑M1/50‑24 (MQ=255) gggCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgccccctt < 1:1797286‑M1/50‑28 (MQ=255) gggCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgccccctt < 1:774621‑M1/50‑28 (MQ=255) gggCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgccccctt > 1:396766‑M1/1‑23 (MQ=255) ggCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgcccccttg > 1:1194805‑M1/1‑22 (MQ=255) tGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgcccccttggg > 1:619021‑M1/1‑19 (MQ=255) cAAGTTGCAGACCGTTAcgagatggacggtcccctcgcccccttggg > 1:2338924‑M1/1‑17 (MQ=255) tGCAGACCGTTAcgagatggacggtcccctcgcccccttggggagagggt > 1:174048‑M1/1‑12 (MQ=255) aGACCGTTAcgagatggacggtcccctcgcccccttggggagagggttag > 1:222185‑M1/1‑9 (MQ=255) aCCGTTAcgagatggacggtcccctcgcccccttggggagagggttaggg < 1:1806552‑M1/50‑44 (MQ=255) ccGTTAcgagatggacggtcccctcgcccccttggggagagggttagggt < 1:89375‑M1/50‑45 (MQ=255) cGTTAcgagatggacggtcccctcgcccccttggggagagggttagggtg < 1:2059308‑M1/50‑46 (MQ=255) cGTTAcgagatggacggtcccctcgcccccttggggagagggttagggt > 1:2200908‑M1/1‑5 (MQ=255) tAcgagatggacggtcccctcgcccccttggggagagggttagggtgagg > 1:165572‑M1/1‑2 (MQ=255) | GAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTCAGCCCG > NC_000913/380066‑380159 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |