Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 1,627,518 Δ25,244 bp [ydfG]–[ynfP] 48 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 1627518 1652761 25244 36 [0] [0] 38 [ydfG]–[ynfP] [ydfG],ydfH,ydfZ,ydfI,ydfJ,ynfT,ydfK,pinQ,tfaQ,ydfN,nohA,ynfO,ydfO,gnsB,ynfN,ynfR,ynfQ,cspI,rzpQ,rzoQ,rrrQ,ydfR,essQ,cspB,cspF,ynfS,ydfT,ydfU,rem,hokD,relE,relB,ydfV,flxA,ydfW,ydfX,dicC,dicA,ydfA,ydfB,ydfC,dicF,dicB,ydfD,ydfE,insD‑7,intQ,[ynfP]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 16275170 (0.000)36 (1.340) 26/96 0.0 100% coding (1/747 nt) ydfG 3‑hydroxy acid dehydrogenase
?NC_000913 1652762 = 0 (0.000)coding (77/111 nt) ynfP protein YnfP

CATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1627469‑1627517
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCT  >  NC_000913/1652762‑1652807
                                                                                               
CATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAA                                               <  1:1165501/50‑1
CATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAA                                               <  1:936139/50‑1
CATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAA                                               <  1:2141706/50‑1
 ATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAG                                              >  1:430369/1‑50
 ATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAG                                              >  1:1819739/1‑50
    CCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                            <  1:797776/49‑1
     CGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCG                                            >  1:1130345/1‑48
       TGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGT                                        <  1:581960/50‑1
       TGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGT                                        >  1:2083506/1‑50
        GCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTG                                       >  1:1027345/1‑50
          TATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCC                                     >  1:1385418/1‑50
           ATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCC                                     >  1:555273/1‑49
            TGTTATTGACACACAAAAGCGTTGAGGGACAGTGAGAAGCGCAGTGCC                                     <  1:1483226/48‑1
            TGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCA                                   <  1:1229801/50‑1
             GTTATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAG                                  >  1:2024630/1‑50
                ATTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCA                               >  1:1468810/1‑50
                 TTGACACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCA                               <  1:834081/49‑1
                     CACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCG                          <  1:1984509/50‑1
                     CACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCG                          <  1:1686608/50‑1
                     CACACAAAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCG                          <  1:239769/50‑1
                           AAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTG                    >  1:286825/1‑50
                           AAAGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTG                    >  1:335813/1‑50
                             AGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCT                  <  1:15416/50‑1
                             AGCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCT                  <  1:866251/50‑1
                              GCGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTG                 <  1:1350051/50‑1
                               CGTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGC                <  1:786821/50‑1
                                GTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCT               >  1:1939418/1‑50
                                GTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCT               <  1:1482852/50‑1
                                GTTGAGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCT               >  1:526781/1‑50
                                    AGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCA           >  1:1323051/1‑50
                                    AGGAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTC            <  1:462667/49‑1
                                      GAACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACC         <  1:1415045/50‑1
                                       AACAGTGAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCA        <  1:980191/50‑1
                                             GAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCT  >  1:1332277/1‑50
                                             GAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCT  >  1:1826273/1‑50
                                             GAGAAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCT  >  1:943118/1‑50
                                                                                               
CATCCCGTGCTATGTTATTGACACACAAAAGCGTTGAGGAACAGTGAGA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1627469‑1627517
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aAGCGCAGTGCCCAGCCATCCCGATACTGCTGCTTTCACCAAATCCT  >  NC_000913/1652762‑1652807

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.