| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 1,388,889 | Δ9,734 bp | ycjG–[uspE] | ycjG, mpaA, ymjC, ymjD, ycjY, pgrR, mppA, ynaI, insH‑4, ynaJ, [uspE] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 1388889 | 1398622 | 9734 | 24 [0] | [0] 24 | ycjG–[uspE] | ycjG,mpaA,ymjC,ymjD,ycjY,pgrR,mppA,ynaI,insH‑4,ynaJ,[uspE] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 1388888 | 0 (0.000) | 23 (0.860) | 20/96 | 0.1 | 100% | intergenic (‑77/‑42) | tpx/ycjG | lipid hydroperoxide peroxidase/L‑Ala‑D/L‑Glu epimerase |
| ? | NC_000913 | 1398623 = | 0 (0.000) | intergenic (‑1/+151) | uspE/fnr | universal stress protein with a role cellular motility/DNA‑binding transcriptional dual regulator FNR | |||||
ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTTGCGCTTAATCCGCAGACCACCGCGACAACAAGGAGTAAAGATGAGA > NC_000913/1388840‑1388935 | aCGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATT < 1:1400804‑M1/49‑1 (MQ=255) gTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTa > 1:2325116‑M1/1‑47 (MQ=255) tCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTacag < 1:2104027‑M1/50‑5 (MQ=255) acacCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTacaggg > 1:1263894‑M1/1‑44 (MQ=255) ccTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTacagggtct > 1:2164304‑M1/1‑41 (MQ=255) gTTTATGCTAACTGTCAATAACACAGCAAACGCTATTacagggtctcct > 1:1616696‑M1/1‑37 (MQ=255) gTTTATGCTAACTGTCAATAACACAGCAAACGCTATTacagggtctcc < 1:918453‑M1/48‑12 (MQ=255) gTTTATGCTAACTGTCAATAACACAGCAAACGCTATTacagggtctcc < 1:233766‑M1/48‑12 (MQ=255) tATGCTAACTGTCAATAACACAGCAAACGCTATTacagggtctccttac < 1:1751599‑M1/49‑16 (MQ=255) aCTGTCAATAACACAGCAAACGCTATTacagggtctccttacaacaact < 1:1480629‑M1/49‑23 (MQ=255) cAATAACACAGCAAACGCTATTacagggtctccttacaacaactgtcaac > 1:269885‑M1/1‑22 (MQ=255) aaTAACACAGCAAACGCTATTacagggtctccttacaacaactgtcaacg < 1:2059291‑M1/50‑30 (MQ=255) aTAACACAGCAAACGCTATTacagggtctccttacaacaactgtcaacgc < 1:168591‑M1/50‑31 (MQ=255) tAACACAGCAAACGCTATTacagggtctccttacaacaactgtcaacgca < 1:1522789‑M1/50‑32 (MQ=255) aaCACAGCAAACGCTATTacagggtctccttacaacaactgtcaacgcag > 1:1525526‑M1/1‑18 (MQ=255) cacaGCAAACGCTATTacagggtctccttacaacaactgtcaacgcagtt > 1:734489‑M1/1‑16 (MQ=255) cacaGCAAACGCTATTacagggtctccttacaacaactgtcaacgcagtt < 1:76007‑M1/50‑35 (MQ=255) aGCAAACGCTATTacagggtctccttacaacaactgtcaacgcagtttg > 1:2262319‑M1/1‑13 (MQ=255) cAAACGCTATTacagggtctccttacaacaactgtcaacgcagtttgtaa < 1:2344842‑M1/50‑40 (MQ=255) aTTacagggtctccttacaacaactgtcaacgcagtttgtaattaa > 1:470518‑M1/1‑3 (MQ=255) ttacagggtctccttgcaacaactgtcaacgcagtttgtaattaaaaga < 1:487769‑M1/49‑48 (MQ=255) ttacagggtctccttacaacaactgtcaacgcagtttgtaattaaaag < 1:2052753‑M1/48‑47 (MQ=255) ttacagggtctccttacaacaactgtcaacgcagtttgtaattaaaag < 1:289608‑M1/48‑47 (MQ=255) ttacagggtctccttacaacaactgtcaacgcagtttgtaattaaaag < 1:714460‑M1/48‑47 (MQ=255) | ACGTCACACCTAGTTTATGCTAACTGTCAATAACACAGCAAACGCTATTTGCGCTTAATCCGCAGACCACCGCGACAACAAGGAGTAAAGATGAGA > NC_000913/1388840‑1388935 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |