| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,320,144 | Δ16,489 bp | [atoS]–[yfaA] | [atoS], atoC, atoD, atoA, atoE, atoB, yfaP, yfaQ, yfaS, yfaT, [yfaA] | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2320144 | 2336632 | 16489 | 27 [0] | [0] 27 | [atoS]–[yfaA] | [atoS],atoC,atoD,atoA,atoE,atoB,yfaP,yfaQ,yfaS,yfaT,[yfaA] |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2320143 | 0 (0.000) | 27 (1.010) | 23/96 | 0.1 | 100% | coding (101/1827 nt) | atoS | sensory histidine kinase AtoS |
| ? | NC_000913 | 2336633 = | 0 (0.000) | coding (12/1689 nt) | yfaA | DUF2138 domain‑containing protein YfaA | |||||
TGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAA > NC_000913/2320095‑2320188 | tGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATt > 1:1162845‑M1/1‑49 (MQ=255) gCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcac > 1:1801298‑M1/1‑44 (MQ=255) cAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcacca > 1:1238886‑M1/1‑43 (MQ=255) cAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcacca > 1:2185805‑M1/1‑43 (MQ=255) cTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcat < 1:622902‑M1/50‑13 (MQ=255) tGATGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcatt > 1:2187992‑M1/1‑37 (MQ=255) aTGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgc > 1:1999062‑M1/1‑35 (MQ=255) aTGGTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcatt < 1:1429113‑M1/48‑14 (MQ=255) gTCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccac < 1:640645‑M1/50‑19 (MQ=255) tCATTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccaca > 1:396541‑M1/1‑31 (MQ=255) aTTGTCCCAACGCTTACTATTGGTTATATttcaccactcattgccacatt > 1:1760663‑M1/1‑29 (MQ=255) tCCCAACGCTTACTATTGGTTATATttcaccactcattgccacattcctt < 1:1829262‑M1/50‑26 (MQ=255) aaCGCTTACTATTGGTTATATttcaccactcattgccacattccttgtg > 1:913359‑M1/1‑21 (MQ=255) cGCTTACTATTGGTTATATttcaccactcattgccacattccttgtgtat < 1:1143931‑M1/50‑32 (MQ=255) cGCTTACTATTGGTTATATttcaccactcattgccacattccttgtgta > 1:183157‑M1/1‑19 (MQ=255) cGCTTACTATTGGTTATATttcaccactcattgccaaattccttgtgtat < 1:1909645‑M1/50‑32 (MQ=255) cTTACTATTGGTTATATttcaccactcattgccacattccttgtgtatag > 1:1969082‑M1/1‑17 (MQ=255) tACTATTGGTTATATttcaccactcattgccacattccttgtgtatagc > 1:2036934‑M1/1‑15 (MQ=255) aCTATTGGTTATATttcaccactcattgccacattccttgtgtatagc > 1:2186722‑M1/1‑14 (MQ=255) aCTATTGGTTATATttcaccactcattgccacattccttgtgtatagc > 1:716375‑M1/1‑14 (MQ=255) cTATTGGTTATATttcaccactcattgccacattccttgtgtatagccag > 1:2136529‑M1/1‑13 (MQ=255) ttGGTTATATttcaccactcattgccacattccttgtgtatagccagc < 1:826000‑M1/48‑39 (MQ=255) ttGGTTATATttcaccactcattgccacattccttgtgtatagccagc < 1:940464‑M1/48‑39 (MQ=255) tGGTTATATttcaccactcattgccacattccttgtgtatagccagccat > 1:354591‑M1/1‑9 (MQ=255) ggTTATATttcaccactcattgccacattccttgtgtatagccagccat < 1:1848886‑M1/49‑42 (MQ=255) tataTttcaccactcattgccacattccttgtgtatagccagccattttt > 1:1194436‑M1/1‑5 (MQ=255) atatttcaccactcattgccacattccttgtgtatagccagccattttt < 1:1547840‑M1/49‑46 (MQ=255) | TGATGGCAATCCTGATGGTCATTGTCCCAACGCTTACTATTGGTTATATCGTAGAAACGGAAGGACGTTCAGCAGTCTTATCTGAAAAAGAGAA > NC_000913/2320095‑2320188 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |