| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1994264 = | 33 (1.080) | 64 (3.000) +ATTTCTAATGTCGT |
4/68 | 1.8 | 68.7% | coding (443/1833 nt) | uvrC | excision nuclease subunit C |
| ? | NC_000913 | 3208976 = | 50 (1.640) | coding (953/1464 nt) | ttdT | L‑tartrate:succinate antiporter | |||||
ACTGGCGCTACTGCAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1994284‑1994264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGATGCTGCTTCTGCG > NC_000913/3208976‑3208994 |||||||||||||| atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:1029441/3‑49atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:2362781/3‑49atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:1993579/3‑49atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:1364133/3‑49atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:951379/3‑49atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACGGATGCTGCTT > 1:1858139/3‑49 tTGGCGCTACTGCGAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC < 1:267933/48‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:225822/2‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:1056712/2‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC < 1:1562507/48‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:1701385/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:1260718/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:75161/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:71368/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:250498/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:2181231/47‑1 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:346380/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:1652625/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:1637176/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:387038/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:626406/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:935877/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:1237774/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:240716/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG > 1:339789/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG > 1:113201/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG > 1:351697/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG > 1:1878268/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG > 1:434245/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG > 1:712157/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1983891/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:381866/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:2258096/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1342026/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1119443/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg > 1:3284/1‑48 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg < 1:289136/49‑2 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg > 1:1053274/1‑48 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg > 1:2186162/1‑48 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg > 1:2125508/1‑48 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg > 1:167415/1‑48 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg > 1:1304710/1‑48 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1055243/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:805567/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:2107099/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1287122/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1924609/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:712760/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1436362/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1372792/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:624783/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTAACTGATGCTGCTTCTG < 1:580508/48‑1 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:597620/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:2277913/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:1374780/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:69833/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:449085/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:411717/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:1519891/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:197349/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:2205848/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:811487/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:1246399/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:2245025/49‑3 |||||||||||||| ACTGGCGCTACTGCAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1994284‑1994264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGATGCTGCTTCTGCG > NC_000913/3208976‑3208994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |