| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1994264 = | 33 (1.080) | 64 (3.000) +ATTTCTAATGTCGT |
4/68 | 1.8 | 68.7% | coding (443/1833 nt) | uvrC | excision nuclease subunit C |
| ? | NC_000913 | 3208976 = | 50 (1.640) | coding (953/1464 nt) | ttdT | L‑tartrate:succinate antiporter | |||||
GCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGG > NC_000913/1994217‑1994311 | gcgagcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAAt > 1:2166408/1‑49 (MQ=255)gcgagcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAAt < 1:1317477/49‑1 (MQ=255) cgagcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATc > 1:753979/1‑49 (MQ=255) cgagcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATc < 1:1237591/49‑1 (MQ=255) gcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCttt < 1:395091/49‑1 (MQ=255) gCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAg > 1:1065213/1‑48 (MQ=255) gCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAg > 1:752886/1‑48 (MQ=255) gCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAg > 1:1988056/1‑48 (MQ=255) cGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAg > 1:978231/1‑47 (MQ=255) cGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGt < 1:1859056/48‑1 (MQ=255) cGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGt < 1:39998/48‑1 (MQ=255) aTAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgc > 1:1105146/1‑49 (MQ=255) tAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcg > 1:1867323/1‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:1519891‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:2245025‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:197349‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:2205848‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:2277913‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:411717‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:449085‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:597620‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:69833‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:811487‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:1374780‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:1246399‑M1/34‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:1053274‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:2125508‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:2186162‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:1304710‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:289136‑M1/17‑1 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:3284‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:167415‑M1/33‑49 (MQ=255) cagaagcagcatcagttacgacattagaaatATCCTTTGCAGTAgcgc < 1:580508‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1287122‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:624783‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:712760‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:805567‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1055243‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1436362‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:2107099‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1372792‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1924609‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:434245‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:351697‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:339789‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:113201‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:712157‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:1878268‑M1/32‑49 (MQ=255) aaCACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcgc < 1:1841963/48‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:2258096‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:1342026‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:1119443‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:381866‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:1983891‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:935877‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:1637176‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:1237774‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:240716‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:1652625‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:387038‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:626406‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:346380‑M1/31‑49 (MQ=255) acacTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcgc > 1:1468593/1‑47 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1562507‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa > 1:1056712‑M1/30‑48 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa > 1:225822‑M1/30‑48 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTCGCAGTAGCGCcaa < 1:267933‑M1/20‑2 (MQ=255) acTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgt > 1:1968869/1‑49 (MQ=255) acTATTTTCGCACTGGCAAATGGGGAAAATCTTTTGCAGTAGCGCCAgt < 1:470146/49‑1 (MQ=255) aagcagcatccgtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:1858139‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:951379‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:1993579‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:1364133‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:2362781‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:1029441‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:75161‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:250498‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:71368‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1701385‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:2181231‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1260718‑M1/20‑2 (MQ=255) aTTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGtt > 1:511375/1‑49 (MQ=255) gCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGt < 1:2224970/49‑1 (MQ=255) cACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTa > 1:465056/1‑49 (MQ=255) aCTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTAc > 1:802653/1‑49 (MQ=255) cTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACg > 1:314299/1‑49 (MQ=255) tGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACgg > 1:2264800/1‑49 (MQ=255) gCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGc < 1:696420/48‑1 (MQ=255) cGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCa > 1:455619/1‑48 (MQ=255) gAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCa > 1:1158555/1‑47 (MQ=255) aTGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGc > 1:1799958/1‑49 (MQ=255) tGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGcc < 1:735945/49‑1 (MQ=255) tGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGcc < 1:261044/49‑1 (MQ=255) tGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGcc < 1:939046/49‑1 (MQ=255) ggggAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCa > 1:1391028/1‑49 (MQ=255) ggAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCAtt < 1:1389098/49‑1 (MQ=255) aaaaTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCg > 1:40193/1‑49 (MQ=255) aTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCggg > 1:572106/1‑48 (MQ=255) | GCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGG > NC_000913/1994217‑1994311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |