New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 380111	0 (0.000)	11 (0.410) +CGAGAT	10/84	0.9	40.5%	coding (732/774 nt)	yaiO	outer membrane protein YaiO
	?	NC_000913	4070444 =	37 (1.220)					intergenic (‑43/+71)	yihR/yihS	putative aldose 1‑epimerase YihR/sulfoquinovose isomerase

AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTC  >  NC_000913/380063‑380153                                                 |                                           aaGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTa                                            >  1:1880628/1‑49 (MQ=255)  aGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAc                                           >  1:512182‑M1/1‑48 (MQ=255)     aaTCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgag                                        <  1:2331555‑M1/49‑5 (MQ=255)          gAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatgga                                   >  1:202778‑M1/1‑40 (MQ=255)            aTTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacg                                 <  1:1028474‑M1/49‑12 (MQ=255)                 cAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtccc                            >  1:1947580‑M1/1‑33 (MQ=255)                 cAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtccc                            <  1:437464‑M1/49‑17 (MQ=255)                     tCAGACGGGCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcg                        >  1:2251460‑M1/1‑29 (MQ=255)                            ggCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgccccctt                 >  1:305736‑M1/1‑22 (MQ=255)                            ggCTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgccccctt                 >  1:752089‑M1/1‑22 (MQ=255)                              cTGCAAGTTGCAGACCGTTAcgagatggacggtcccctcgcccccttgg               >  1:444940‑M1/1‑20 (MQ=255)                                  aaGTTGCAGACCGTTAcgagatggacggtcccctcgcccccttggg              >  1:395756‑M1/1‑16 (MQ=255)                                         aGACCGTTAcgagatggacggtcccctcgcccccttggggagagggtta    <  1:7476‑M1/49‑41 (MQ=255)                                           aCCGTTAcgagatggacggtcccctcgcccccttggggagagggttagg  >  1:646038‑M1/1‑7 (MQ=255)                                                 |                                           AAGGAATCAGAATTTCCAGGTCAGACGGGCTGCAAGTTGCAGACCGTTAAAATCATCGGTTGGGGTGTCGTACCACACTTTACCTGCCGTC  >  NC_000913/380063‑380153

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.