| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 92,854 | (GCG)4→3 | coding (1442‑1444/1767 nt) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 92844 | 92846 | 3 | 26 [0] | [0] 24 | ftsI | peptidoglycan DD‑transpeptidase FtsI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 92847 = | 0 (0.000) | 18 (0.620) | 16/76 | 0.3 | 100% | coding (1435/1767 nt) | ftsI | peptidoglycan DD‑transpeptidase FtsI |
| ? | NC_000913 | = 92843 | 0 (0.000) | coding (1431/1767 nt) | ftsI | peptidoglycan DD‑transpeptidase FtsI | |||||
TGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAA > NC_000913/92801‑92895 | cattgtccgcactgtggtgcatatgatggaaagcgtggcgctaccaggc < 1:772836‑M1/3‑1 (MQ=255) attgtccgcactgtggtgcatatgatggaaagcgtggcgctaccaggcg < 1:1719647‑M1/4‑1 (MQ=255) gtccgcactgtggtgcatatgatggaaagcgtggcgctaccaggcggcg < 1:73368‑M1/7‑1 (MQ=255) gtccgcactgtggtgcatatgatggaaagcgtggcgctaccaggcggc > 1:2280251‑M1/43‑48 (MQ=255) tccgcactgtggtgcatatgatggaaagcgtggcgctaccaggcggcgg < 1:694071‑M1/8‑1 (MQ=255) gcactgtggtgcatatgatggaaagcgtggcgctaccaGGCGGCGGCGt > 1:1015323‑M1/39‑49 (MQ=255) cactgtggtgcatatgatggaaagcgtggcgctaccaGGCGGCGGCGTg > 1:1751235‑M1/38‑49 (MQ=255) ctgtggtgcatatgatggaaagcgtggcgctaccaGGCGGCGGCGTGaa > 1:224564‑M1/36‑49 (MQ=255) tgcatatgatggaaagcgtggcgctaccaGGCGGCGGCGTGAaggcgga > 1:477556‑M1/30‑48 (MQ=255) catatgatggaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGa < 1:312425‑M1/22‑1 (MQ=255) atgatggaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGAtt < 1:2017045‑M1/24‑1 (MQ=255) tgatggaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTa < 1:1969018‑M1/25‑1 (MQ=255) atggaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAg > 1:2251084‑M1/22‑49 (MQ=255) gaaagcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCt > 1:1016227‑M1/19‑49 (MQ=255) agcgtggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtatc > 1:2784301‑M1/16‑49 (MQ=255) tggcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtatcgtat > 1:2323216‑M1/12‑49 (MQ=255) gcgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCtatcgtatcg < 1:1692800‑M1/40‑1 (MQ=255) cgctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGc < 1:1005464‑M1/41‑1 (MQ=255) gctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGc < 1:1518113‑M1/41‑1 (MQ=255) ctaccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCa > 1:2848443‑M1/7‑49 (MQ=255) ccaGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTa > 1:2738334‑M1/4‑49 (MQ=255) aGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTaaa > 1:2622092‑M1/2‑49 (MQ=255) aGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTaaa > 1:2111649‑M1/2‑49 (MQ=255) GGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTaaaa < 1:1171445‑M1/49‑1 (MQ=255) | TGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATTAAAA > NC_000913/92801‑92895 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |