| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 92,854 | (GCG)4→3 | coding (1442‑1444/1767 nt) | ftsI → | peptidoglycan DD‑transpeptidase FtsI |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 92844 | 92846 | 3 | 26 [0] | [0] 24 | ftsI | peptidoglycan DD‑transpeptidase FtsI |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 92847 = | 0 (0.000) | 18 (0.620) | 16/76 | 0.3 | 100% | coding (1435/1767 nt) | ftsI | peptidoglycan DD‑transpeptidase FtsI |
| ? | NC_000913 | = 92843 | 0 (0.000) | coding (1431/1767 nt) | ftsI | peptidoglycan DD‑transpeptidase FtsI | |||||
ATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATT > NC_000913/92795‑92891 | aTCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCa < 1:902617/49‑1 (MQ=255)aTCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCa < 1:1582074/49‑1 (MQ=255)aTCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCa < 1:24901/49‑1 (MQ=255) cATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggc < 1:772836‑M2/49‑4 (MQ=255) aTTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcg < 1:1719647‑M2/49‑5 (MQ=255) gTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcg < 1:73368‑M2/49‑8 (MQ=255) gTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggc > 1:2280251‑M2/1‑42 (MQ=255) tCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcgg < 1:694071‑M2/49‑9 (MQ=255) gCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcggcgt > 1:1015323‑M2/1‑38 (MQ=255) cACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtg > 1:1751235‑M2/1‑37 (MQ=255) cTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaa > 1:224564‑M2/1‑35 (MQ=255) tgCATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcgga > 1:477556‑M2/1‑29 (MQ=255) cATATGATGGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcga < 1:312425‑M2/49‑23 (MQ=255) atgatgGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgatt < 1:2017045‑M2/48‑25 (MQ=255) tgatgGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgatta < 1:1969018‑M2/48‑26 (MQ=255) atgGAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaag > 1:2251084‑M2/1‑21 (MQ=255) gAAAGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaaggct > 1:1016227‑M2/1‑18 (MQ=255) aGCGTGGCGCTACCAggcggcggcgtgaaggcggcgattaaaggctatc > 1:2784301‑M2/1‑15 (MQ=255) tGGCGCTACCAggcggcggcgtgaaggcggcgattaaaggctatcgtat > 1:2323216‑M2/1‑11 (MQ=255) gcgcTACCAggcggcggcgtgaaggcggcgattaaaggctatcgtatcg < 1:1692800‑M2/49‑41 (MQ=255) cgcTACCAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgc < 1:1005464‑M2/49‑42 (MQ=255) gcTACCAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgc < 1:1518113‑M2/48‑42 (MQ=255) cTACCAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgcca > 1:2848443‑M2/1‑6 (MQ=255) ccAggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccatta > 1:2738334‑M2/1‑3 (MQ=255) aggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccattaaa > 1:2622092‑M2/1‑1 (MQ=255) aggcggcggcgtgaaggcggcgattaaaggctatcgtatcgccattaaa > 1:2111649‑M2/1‑1 (MQ=255) | ATCCATTGTCCGCACTGTGGTGCATATGATGGAAAGCGTGGCGCTACCAGGCGGCGGCGGCGTGAAGGCGGCGATTAAAGGCTATCGTATCGCCATT > NC_000913/92795‑92891 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |