| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,509,631 | Δ8,319 bp | [yfeO]–pdeA | [yfeO], ypeC, mntH, nupC, insL‑3, pdeA | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2509631 | 2517949 | 8319 | 26 [0] | [0] 26 | [yfeO]–pdeA | [yfeO],ypeC,mntH,nupC,insL‑3,pdeA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2509630 | 0 (0.000) | 25 (0.680) | 18/96 | 0.4 | 100% | coding (1/1257 nt) | yfeO | putative transport protein YfeO |
| ? | NC_000913 | 2517950 = | 0 (0.000) | intergenic (‑118/+91) | pdeA/alaX | putative c‑di‑GMP phosphodiesterase PdeA/tRNA‑Ala | |||||
GGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517908‑2517998 | ctgggcaaactaagtatctgaccccgcataaggaatagaacaCAggcgg < 1:2102163‑M2/7‑1 (MQ=255) gcaaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACt < 1:1312606‑M2/11‑1 (MQ=255) aaactaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTaa > 1:1747068‑M2/37‑49 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:2615765‑M2/15‑1 (MQ=255) actaagtatctgaccccgcataaggaatagaacaCAGGCGGCACTAAcc < 1:154399‑M2/15‑1 (MQ=255) gtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc > 1:848215‑M2/30‑49 (MQ=255) gtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:1153978‑M2/20‑1 (MQ=255) gtatctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGAc < 1:1446227‑M2/20‑1 (MQ=255) ctgaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACg > 1:250224‑M2/26‑46 (MQ=255) gaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGAc > 1:1281614‑M2/24‑49 (MQ=255) gaccccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGAc > 1:237751‑M2/24‑49 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTa < 1:1681652‑M2/23‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTa < 1:120431‑M2/23‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACt < 1:2403455‑M2/27‑1 (MQ=255) accccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACt > 1:402898‑M2/23‑49 (MQ=255) cccgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGt < 1:1548044‑M2/29‑1 (MQ=255) cgcataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTAt < 1:2046240‑M2/31‑1 (MQ=255) ataaggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTAc < 1:2671855‑M2/34‑1 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa < 1:2659666‑M2/36‑1 (MQ=255) aggaatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACaa < 1:610797‑M2/36‑1 (MQ=255) aatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc < 1:22607‑M2/40‑1 (MQ=255) aatagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGc < 1:1776886‑M2/40‑1 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCg < 1:2722385‑M2/41‑1 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCg > 1:2817079‑M2/9‑49 (MQ=255) atagaacaCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCg > 1:1137542‑M2/9‑49 (MQ=255) cAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAg < 1:12094/49‑1 (MQ=255) | GGGCCAGCCTGTTGCCGATTTTTCATCCAATGATGCTTTCACCAGGCGGCACTAACCCGGACGTAGACTGTATTACAAAAGCGGCAAAAAG > NC_000913/2517908‑2517998 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |