| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1994264 = | 30 (1.090) | 41 (2.130) +ATTTCTAATGTCGT |
4/68 | 1.7 | 73.1% | coding (443/1833 nt) | uvrC | excision nuclease subunit C |
| ? | NC_000913 | 3208976 = | 13 (0.470) | coding (953/1464 nt) | ttdT | L‑tartrate:succinate antiporter | |||||
ACTGGCGCTACTGCAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1994284‑1994264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGATGCTGCTTCTGCG > NC_000913/3208976‑3208994 |||||||||||||| atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:1502165/3‑49atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:1490538/3‑49atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:2107428/3‑49atTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT > 1:1262033/3‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC < 1:1283642/48‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:1631732/2‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC < 1:1897057/48‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:2039910/2‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:1472030/2‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC < 1:310926/48‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:376808/2‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:853737/2‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:919184/2‑49 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC < 1:997260/48‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:1052609/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:223484/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:335178/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:80001/47‑1 tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:1663530/47‑1 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:1788709/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:1224580/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG > 1:635207/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG > 1:910773/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:177690/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1250893/48‑1 GGCGCTACTGCAAAGGATATCTCTAATGTCGTCACTGATGCTGCTTCT < 1:1089530/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg < 1:1762434/49‑2 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg > 1:1096254/1‑48 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg > 1:458081/1‑48 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg < 1:1112273/49‑2 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:65377/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1569689/48‑1 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:894154/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:1072156/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:101616/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:532957/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:1364615/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:217023/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:1366987/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:1536469/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:1665946/49‑3 |||||||||||||| ACTGGCGCTACTGCAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1994284‑1994264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGATGCTGCTTCTGCG > NC_000913/3208976‑3208994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |