| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1994264 = | 30 (1.090) | 41 (2.130) +ATTTCTAATGTCGT |
4/68 | 1.7 | 73.1% | coding (443/1833 nt) | uvrC | excision nuclease subunit C |
| ? | NC_000913 | 3208976 = | 13 (0.470) | coding (953/1464 nt) | ttdT | L‑tartrate:succinate antiporter | |||||
GCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGG > NC_000913/1994217‑1994311 | gcgagcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAAt < 1:1229670/49‑1 (MQ=255) cgagcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATc > 1:566838/1‑49 (MQ=255) gagcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCt < 1:555265/49‑1 (MQ=255) agcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCtt > 1:709810/1‑49 (MQ=255) gcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCttt > 1:1217681/1‑49 (MQ=255) gaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTg > 1:1053736/1‑49 (MQ=255) ttGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTg > 1:124595/1‑47 (MQ=255) ttGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCa < 1:238735/49‑1 (MQ=255) tGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAg > 1:181935/1‑49 (MQ=255) cGATAAACACTATTTTCGTACTGGCGAATGGGGAAAATCTTTTGCAGTa < 1:1815148/49‑1 (MQ=255) cGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAg > 1:665633/1‑47 (MQ=255) cGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTa < 1:590596/49‑1 (MQ=255) aTAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgc < 1:1372759/49‑1 (MQ=255) tAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcg > 1:1544974/1‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:217023‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:532957‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:1665946‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:894154‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:1536469‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:101616‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:1366987‑M1/34‑49 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg < 1:1364615‑M1/16‑1 (MQ=255) accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg > 1:1072156‑M1/34‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:458081‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc > 1:1096254‑M1/33‑49 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1112273‑M1/17‑1 (MQ=255) ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1762434‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:1569689‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc < 1:65377‑M1/17‑1 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:910773‑M1/32‑49 (MQ=255) cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc > 1:635207‑M1/32‑49 (MQ=255) agaagcagcatcagtgacgacattagagatATCCTTTGCAGTAGCGcc < 1:1089530‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:177690‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc < 1:1250893‑M1/18‑1 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:1788709‑M1/31‑49 (MQ=255) agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa > 1:1224580‑M1/31‑49 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1283642‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa > 1:1472030‑M1/30‑48 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1897057‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:997260‑M1/20‑2 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa > 1:2039910‑M1/30‑48 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa > 1:853737‑M1/30‑48 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa > 1:1631732‑M1/30‑48 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa > 1:376808‑M1/30‑48 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa > 1:919184‑M1/30‑48 (MQ=255) gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:310926‑M1/20‑2 (MQ=255) cacTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAg < 1:1136404/49‑1 (MQ=255) cacTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAg > 1:1341467/1‑49 (MQ=255) acTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgt < 1:2002155/49‑1 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:1262033‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:2107428‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:1502165‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGccaat > 1:1490538‑M1/29‑47 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:80001‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1052609‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:335178‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:223484‑M1/20‑2 (MQ=255) aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa < 1:1663530‑M1/20‑2 (MQ=255) cTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgtg > 1:56739/1‑49 (MQ=255) cTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgtg > 1:1719885/1‑49 (MQ=255) tATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAgtgt > 1:342046/1‑49 (MQ=255) ttCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTc < 1:1921511/48‑1 (MQ=255) tCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCa < 1:82181/48‑1 (MQ=255) cGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCAc < 1:149323/48‑1 (MQ=255) cTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACg < 1:1508809/49‑1 (MQ=255) gCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGc < 1:1801046/48‑1 (MQ=255) cGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCa > 1:910225/1‑48 (MQ=255) cGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCAt < 1:1539638/49‑1 (MQ=255) gAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCa > 1:1334495/1‑47 (MQ=255) aaTGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAg < 1:2075470/49‑1 (MQ=255) ggAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCAtt < 1:434911/49‑1 (MQ=255) aTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCggg > 1:219110/1‑48 (MQ=255) | GCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGG > NC_000913/1994217‑1994311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |