| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1994264 = | 30 (1.090) | 41 (2.130) +ATTTCTAATGTCGT |
4/68 | 1.7 | 73.1% | coding (443/1833 nt) | uvrC | excision nuclease subunit C |
| ? | NC_000913 | 3208976 = | 13 (0.470) | coding (953/1464 nt) | ttdT | L‑tartrate:succinate antiporter | |||||
ATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAA > NC_000913/3208937‑3209024 | aTTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGAtgct > 1:1987529/1‑49 (MQ=255) atatCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATgctgct > 1:1225828/1‑49 (MQ=255) tatCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATgctgct < 1:1589992/48‑1 (MQ=255) attggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt > 1:2107428‑M2/36‑49 (MQ=255) attggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt > 1:1490538‑M2/36‑49 (MQ=255) attggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt > 1:1502165‑M2/36‑49 (MQ=255) attggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt > 1:1262033‑M2/36‑49 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt < 1:335178‑M2/14‑1 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt < 1:223484‑M2/14‑1 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt < 1:80001‑M2/14‑1 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt < 1:1663530‑M2/14‑1 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt < 1:1052609‑M2/14‑1 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc < 1:310926‑M2/15‑1 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc < 1:997260‑M2/15‑1 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc > 1:2039910‑M2/35‑49 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc > 1:376808‑M2/35‑49 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc < 1:1897057‑M2/15‑1 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc > 1:1631732‑M2/35‑49 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc > 1:853737‑M2/35‑49 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc > 1:919184‑M2/35‑49 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc > 1:1472030‑M2/35‑49 (MQ=255) ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc < 1:1283642‑M2/15‑1 (MQ=255) tggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt > 1:1788709‑M2/34‑49 (MQ=255) tggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt > 1:1224580‑M2/34‑49 (MQ=255) tCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTc < 1:694755/48‑1 (MQ=255) ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt < 1:177690‑M2/16‑1 (MQ=255) ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt < 1:1250893‑M2/16‑1 (MQ=255) ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg > 1:910773‑M2/33‑49 (MQ=255) ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg > 1:635207‑M2/33‑49 (MQ=255) ggcgctactgcaaaggatatctctaatgtcgtCACTGATGCTGCTTCt < 1:1089530‑M2/16‑1 (MQ=255) gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCtgg > 1:458081‑M2/32‑48 (MQ=255) gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCtgg < 1:1112273‑M2/18‑2 (MQ=255) gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCtgg > 1:1096254‑M2/32‑48 (MQ=255) gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCtgg < 1:1762434‑M2/18‑2 (MQ=255) gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg < 1:1569689‑M2/17‑1 (MQ=255) gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg < 1:65377‑M2/17‑1 (MQ=255) gATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTgc < 1:1491460/49‑1 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt > 1:101616‑M2/31‑47 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt < 1:532957‑M2/19‑3 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt > 1:894154‑M2/31‑47 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt > 1:1072156‑M2/31‑47 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt < 1:217023‑M2/19‑3 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt < 1:1665946‑M2/19‑3 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt < 1:1364615‑M2/19‑3 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt > 1:1366987‑M2/31‑47 (MQ=255) cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt > 1:1536469‑M2/31‑47 (MQ=255) aTGCCGCGATGGTCGGTTACAACGTGGTGGCACTGATGCTGCTTCTgcg > 1:1125223/1‑49 (MQ=255) tCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTg < 1:1442810/49‑1 (MQ=255) ggTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTgg > 1:709635/1‑48 (MQ=255) ggTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTgg < 1:736839/48‑1 (MQ=255) aGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACa > 1:963114/1‑49 (MQ=255) cGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACAtt < 1:687952/49‑1 (MQ=255) gtggtgGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTg > 1:885163/1‑49 (MQ=255) gCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGt < 1:1253687/48‑1 (MQ=255) cACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGtaa < 1:1240848/49‑1 (MQ=255) cACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGtaa < 1:1296782/49‑1 (MQ=255) | ATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAGTAA > NC_000913/3208937‑3209024 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |