| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 603,467 | Δ5,885 bp | [ybdG]–insL‑2 | [ybdG], nfsB, ybdF, ybdJ, ybdK, sokE, hokE, insL‑2 | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 603467 | 609351 | 5885 | 29 [0] | [0] 29 | [ybdG]–insL‑2 | [ybdG],nfsB,ybdF,ybdJ,ybdK,sokE,hokE,insL‑2 |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 603466 | 0 (0.000) | 27 (1.030) | 24/92 | 0.0 | 100% | coding (1198/1248 nt) | ybdG | miniconductance mechanosensitive channel YbdG |
| ? | NC_000913 | 609352 = | 0 (0.000) | intergenic (+175/+107) | insL‑2/entD | IS186/IS421 transposase/phosphopantetheinyl transferase EntD | |||||
GTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGC > NC_000913/609306‑609399 | gcttaaatgcacccgccagagagcgaatatcattgccggttggcgaGt > 1:2082533‑M2/47‑48 (MQ=255) cttaaatgcacccgccagagagcgaatatcattgccggttggcgaGTaa > 1:1619504‑M2/46‑49 (MQ=255) taaatgcacccgccagagagcgaatatcattgccggttggcgaGTAATc > 1:1460003‑M2/44‑49 (MQ=255) taaatgcacccgccagagagcgaatatcattgccggttggcgaGTAATc > 1:57748‑M2/44‑49 (MQ=255) aaatgcacccgccagagagcgaatatcattgccggttggcgaGTAATc < 1:11208‑M2/6‑1 (MQ=255) aatgcccccgccagagagcgaatatcattgccggttggcgaGTAATcc < 1:448164‑M2/7‑1 (MQ=255) aatgcacccgccagagagcgaatatcattgccggttggcgaGTAATccc > 1:1294426‑M2/42‑49 (MQ=255) atgcacccgccagagagcgaatatcattgccggttggcgaGTAATcccc < 1:1052176‑M2/9‑1 (MQ=255) atgcacccgccagagagcgaatatcattgccggttggcgaGTAATcccc > 1:1976355‑M2/41‑49 (MQ=255) cacccgccagagagcgaatatcattgccggttggcgaGTAATCCCCGCa > 1:611942‑M2/38‑49 (MQ=255) acccgccagagagcgaatatcattgccggttggcgaGTAATCCCCGCat < 1:423588‑M2/13‑1 (MQ=255) cccgccagagagcgaatatcattgccggttggcgaGTAATCCCCGCata < 1:602794‑M2/14‑1 (MQ=255) cccgccagagagcgaatatcattgccggttggcgaGTAATCCCCGCata > 1:1632782‑M2/36‑49 (MQ=255) agagagcgaatatcattgccggttggcgaGTAATCCCCGCATATCCGGt > 1:1119437‑M2/30‑49 (MQ=255) agagagcgaatatcattgccggttggcgaGTAATCCCCGCATATCCGGt > 1:939570‑M2/30‑49 (MQ=255) agagagcgaatatcattgccggttggcgaGTAATCCCCGCATATCCGGt < 1:423558‑M2/20‑1 (MQ=255) gagagcgaatatcattgccggttggcgaGTAATCCCCGCATATCCGGtt > 1:554230‑M2/29‑49 (MQ=255) agagcgaatatcattgccggttggcgaGTAATCCCCGCATATCCGGTTg > 1:468036‑M2/28‑49 (MQ=255) agagcgaatatcattgccagttggcgaGTAATCCCCGCATATCCGGTTg < 1:1360074‑M2/22‑1 (MQ=255) agcgaatatcattgccggttggcgaGTAATCCCCGCATATCCGGTTgt > 1:2027472‑M2/26‑48 (MQ=255) agcgaatatcattgccggttggcgaGTAATCCCCGCATATCCGGTTgt > 1:200541‑M2/26‑48 (MQ=255) cgaatatcattgccggttggcgaGTAATCCCCGCATATCCGGTTgtcag > 1:1488988‑M2/24‑49 (MQ=255) attgccggttggcgaGTAATCCCCGCATATCCGGTTGTCAGGTCAGGAt < 1:82836‑M2/34‑1 (MQ=255) ttgccggttggcgaGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATg < 1:551895‑M2/35‑1 (MQ=255) cggttggcgaGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGt > 1:293453‑M2/11‑47 (MQ=255) ggttggcgaGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAg > 1:1692103‑M2/10‑49 (MQ=255) ggcgaGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCa < 1:1339346‑M2/43‑1 (MQ=255) gaGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTg > 1:1174119‑M2/3‑49 (MQ=255) aGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGc > 1:1820139‑M2/2‑49 (MQ=255) | GTCGCATTCTTCAGATGGTTCAACCCTTAAGTTAGCGCTTATGGGAGTAATCCCCGCATATCCGGTTGTCAGGTCAGGATGGTAAGGCACCTGC > NC_000913/609306‑609399 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |