| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 1994264 = | 23 (0.850) | 30 (1.570) +ATTTCTAATGTCGT |
3/68 | 2.0 | 66.5% | coding (443/1833 nt) | uvrC | excision nuclease subunit C |
| ? | NC_000913 | 3208976 = | 20 (0.740) | coding (953/1464 nt) | ttdT | L‑tartrate:succinate antiporter | |||||
CTGGCGCTACTGCAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1994283‑1994264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGATGCTGCTTCTGCG > NC_000913/3208976‑3208994 |||||||||||||| tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC < 1:1066363/48‑1tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTC > 1:123264/2‑49tTGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTT < 1:1610565/47‑1 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:1755937/1‑49 TGGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT > 1:1784950/1‑49 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1245778/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1290337/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1327171/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:798613/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:140570/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:793204/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:493229/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:850219/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1624327/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1950674/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1705780/48‑1 GGCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCT < 1:1122647/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg < 1:999268/49‑2 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGg < 1:1079688/49‑2 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1725962/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1946469/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:168767/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1512487/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:643049/48‑1 GCGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTG < 1:1158369/48‑1 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:2022243/1‑47 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:37605/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:1474400/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt < 1:1371017/49‑3 CGCTACTGCAAAGGATATTTCTAATGTCGTCACTGATGCTGCTTCTGgt > 1:839874/1‑47 |||||||||||||| CTGGCGCTACTGCAAAAGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/1994283‑1994264‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CACTGATGCTGCTTCTGCG > NC_000913/3208976‑3208994 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |