New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1994264 =	23 (0.850)	30 (1.570) +ATTTCTAATGTCGT	3/68	2.0	66.5%	coding (443/1833 nt)	uvrC	excision nuclease subunit C
	?	NC_000913	3208976 =	20 (0.740)					coding (953/1464 nt)	ttdT	L‑tartrate:succinate antiporter

CGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAG  >  NC_000913/3208929‑3209021                                                |                                              cggcggTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGc                                               <  1:1634529/48‑1 (MQ=255)  ggcggTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCAc                                             >  1:501111/1‑49 (MQ=255)    cggTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACt                                            >  1:515093/1‑48 (MQ=255)     ggTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGa                                          >  1:1923252/1‑49 (MQ=255)     ggTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGa                                          >  1:1749591/1‑49 (MQ=255)      gTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGAt                                         <  1:1689859/49‑1 (MQ=255)       tGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGAtg                                        <  1:152440/49‑1 (MQ=255)         aTTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGAtgct                                      >  1:776144/1‑49 (MQ=255)              ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCtt                                  <  1:1610565‑M2/14‑1 (MQ=255)              ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc                                 <  1:1066363‑M2/15‑1 (MQ=255)              ttggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTc                                 >  1:123264‑M2/35‑49 (MQ=255)               tggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                >  1:1784950‑M2/34‑49 (MQ=255)               tggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                >  1:1755937‑M2/34‑49 (MQ=255)               tCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCt                                <  1:1028688/49‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:1290337‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:1950674‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:1705780‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:1245778‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:493229‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:1122647‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:1624327‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:1327171‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:793204‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:798613‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:850219‑M2/16‑1 (MQ=255)                ggcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCt                                <  1:140570‑M2/16‑1 (MQ=255)                 gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCtgg                              <  1:999268‑M2/18‑2 (MQ=255)                 gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCtgg                              <  1:1079688‑M2/18‑2 (MQ=255)                 gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg                               <  1:1946469‑M2/17‑1 (MQ=255)                 gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg                               <  1:1512487‑M2/17‑1 (MQ=255)                 gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg                               <  1:643049‑M2/17‑1 (MQ=255)                 gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg                               <  1:168767‑M2/17‑1 (MQ=255)                 gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg                               <  1:1158369‑M2/17‑1 (MQ=255)                 gcgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTCTg                               <  1:1725962‑M2/17‑1 (MQ=255)                  cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt                             <  1:1371017‑M2/19‑3 (MQ=255)                  cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt                             >  1:839874‑M2/31‑47 (MQ=255)                  cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt                             <  1:1474400‑M2/19‑3 (MQ=255)                  cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt                             <  1:37605‑M2/19‑3 (MQ=255)                  cgctactgcaaaggatatttctaatgtcgtCACTGATGCTGCTTctggt                             >  1:2022243‑M2/31‑47 (MQ=255)                       gcgATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTa                        >  1:130929/1‑49 (MQ=255)                            ggTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGt                   >  1:348081/1‑49 (MQ=255)                             gTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGtt                  <  1:1471817/49‑1 (MQ=255)                                 gTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGga              >  1:1647965/1‑49 (MQ=255)                                 gTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGga              <  1:379171/49‑1 (MQ=255)                                   tACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGgac             >  1:1569277/1‑48 (MQ=255)                                    aCAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGgacg            <  1:1949862/48‑1 (MQ=255)                                        cGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACAtt       >  1:337427/1‑49 (MQ=255)                                          tggtggCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGt     <  1:2026794/49‑1 (MQ=255)                                            gtggCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCa   <  1:383957/49‑1 (MQ=255)                                             tggCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAg  <  1:767559/49‑1 (MQ=255)                                                |                                              CGGCGGTGATTATATCGATGCCGCGATGGTCGGTTACAGCGTGGTGGCACTGATGCTGCTTCTGCGCATTATCAGTTGGGACGACATTGTCAG  >  NC_000913/3208929‑3209021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.