New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	1994264 =	23 (0.850)	30 (1.570) +ATTTCTAATGTCGT	3/68	2.0	66.5%	coding (443/1833 nt)	uvrC	excision nuclease subunit C
	?	NC_000913	3208976 =	20 (0.740)					coding (953/1464 nt)	ttdT	L‑tartrate:succinate antiporter

GCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGG  >  NC_000913/1994217‑1994311                                                |                                                gcgagcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAAt                                                >  1:2080718/1‑49 (MQ=255)    agcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCtt                                             <  1:1479190/49‑1 (MQ=255)    agcgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCtt                                             >  1:1314459/1‑49 (MQ=255)      cgaTTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCtttt                                           >  1:1918313/1‑49 (MQ=255)         ttGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCa                                        <  1:1160474/49‑1 (MQ=255)             gATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAg                                    >  1:412351/1‑49 (MQ=255)              aTAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgc                                   >  1:577065/1‑49 (MQ=255)               tAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcg                                  <  1:178598/49‑1 (MQ=255)               accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg                                  >  1:2022243‑M1/34‑49 (MQ=255)               accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg                                  >  1:839874‑M1/34‑49 (MQ=255)               accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg                                  <  1:37605‑M1/16‑1 (MQ=255)               accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg                                  <  1:1371017‑M1/16‑1 (MQ=255)               accagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcg                                  <  1:1474400‑M1/16‑1 (MQ=255)                ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc                                 <  1:1079688‑M1/17‑1 (MQ=255)                ccagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc                                 <  1:999268‑M1/17‑1 (MQ=255)                 cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc                                 <  1:1158369‑M1/17‑1 (MQ=255)                 cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc                                 <  1:1512487‑M1/17‑1 (MQ=255)                 cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc                                 <  1:168767‑M1/17‑1 (MQ=255)                 cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc                                 <  1:1725962‑M1/17‑1 (MQ=255)                 cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc                                 <  1:1946469‑M1/17‑1 (MQ=255)                 cagaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAgcgc                                 <  1:643049‑M1/17‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:1705780‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:1950674‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:1624327‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:493229‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:140570‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:1327171‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:1290337‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:1245778‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:793204‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:798613‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:1122647‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGcc                                <  1:850219‑M1/18‑1 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa                               >  1:1755937‑M1/31‑49 (MQ=255)                  agaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCCa                               >  1:1784950‑M1/31‑49 (MQ=255)                  acacTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAgcgc                                 >  1:1089610/1‑47 (MQ=255)                   gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa                              >  1:123264‑M1/30‑48 (MQ=255)                   gaagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa                              <  1:1066363‑M1/20‑2 (MQ=255)                   cacTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAg                              >  1:547230/1‑49 (MQ=255)                    aagcagcatcagtgacgacattagaaatATCCTTTGCAGTAGCGCcaa                              <  1:1610565‑M1/20‑2 (MQ=255)                        ttttCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGttt                         >  1:1789718/1‑49 (MQ=255)                        ttttCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGtt                          <  1:1512207/48‑1 (MQ=255)                          ttCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTc                        <  1:674957/48‑1 (MQ=255)                             gCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGt                    <  1:1127342/49‑1 (MQ=255)                             gCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGt                    <  1:1075277/49‑1 (MQ=255)                               aCTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTAc                  >  1:719720/1‑49 (MQ=255)                                cTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACg                 >  1:2016105/1‑49 (MQ=255)                                     gAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCa              >  1:2078522/1‑47 (MQ=255)                                       aTGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGc          <  1:243610/49‑1 (MQ=255)                                        tGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGc          >  1:388469/1‑48 (MQ=255)                                          gggAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCa        <  1:1070671/48‑1 (MQ=255)                                           ggAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCAtt      <  1:1166696/49‑1 (MQ=255)                                              aaaTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCgg   >  1:497708/1‑49 (MQ=255)                                                aTCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCggg  >  1:1379789/1‑48 (MQ=255)                                                |                                                GCGAGCGATTGCGATAAACACTATTTTCGCACTGGCGAATGGGGAAAATCTTTTGCAGTAGCGCCAGTGTTTCACGTACGGCATAGCCATTCGGG  >  NC_000913/1994217‑1994311

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.