| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2416377 = | 12 (0.440) | 13 (0.550) | 11/84 | 0.6 | 53.6% | coding (1631/2145 nt) | pta | phosphate acetyltransferase |
| ? | NC_000913 | = 2416373 | 12 (0.510) | coding (1627/2145 nt) | pta | phosphate acetyltransferase | |||||
GGATCCGGGTTGATCGCACAGTCACCGTAAACGTAAACCTGTTCCGGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2416428‑2416377‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcaTGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTGCAGTTTTGATC < NC_000913/2416373‑2416327 GGATCCGGGTTGATCGCACAGTCACCGTAAACGTAAACCTGTTCCGGCA < 1:1388872/49‑1GGATCCGGGTTGATCGCACAGTCACCGTAAACGTAAACCTGTTCCGG > 1:844364/1‑47GGATCCGGGTTGATCGCACAGTCACCGTAAACGTAAACCTGTTCCGG > 1:1229266/1‑47 GATCCGGGTTGATCGCACAGTCACCGTAAACGTAAACCTGTTCCGGCAG < 1:439585/49‑1 CGGGTTGATCGCACAGTCACCGTAAACGTAAACCTGTTCCGGCAGCAT < 1:109822/48‑1 GGTTGATCGCACAGTCACCGTAAACGTAAACCTGTTCCGGCAGCATGAA < 1:111077/49‑1 ATCGCACAGTCACCGTAAACGTAAACCTGTTCCGGCAGCATGAAGAACA > 1:1353221/1‑49 GCACAGTCACCGTAAACGTAAACCTGTTCCGGCAGCATGAAGAACACG < 1:501493/48‑1 ACAGTCACCGTAAACGTAAACCTGTTCCGGCAGCATGAAGAACACGG > 1:1269868/1‑47 ACAGTCACCGTAAACGTAAACCTGTTCCGGCAGCATGAAGAACACGG > 1:1481099/1‑47 TCACCGTAAACGTAAACCTGTTCCGGCAGCATGAAGAACACGGAAGATA < 1:1256243/49‑1 AAACGTAAACCTGTTCCGGCAGCATGAAGAACACGGAAGATACCAGG > 1:1120719/1‑47 AAACGTAAACCTGTTCCGGCAGCATGAAGAACACGGAAGATACCAGG > 1:417248/1‑47 CGTAAACCTGTTCCGGCAGCATGAAGAACACGGAAGATACCAGGGAGCT < 1:777622/49‑1 AAACCTGTTCCGGCAGCATGAAGAACACGGAAGATACCAGGGAGCTGCC > 1:1023182/1‑49 TTCCGGCAGCATGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTG < 1:2079671/47‑1 CCGGCAGCATGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTGCAGT > 1:1098944/1‑49 GCATGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTGCAGTTTTGAT > 1:946869/1‑49 GCATGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTGCAGTTTTGAT > 1:1907350/1‑49 CATGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTGCAGTTTTGATC < 1:371269/49‑1 CATGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTGCAGTTTTGATC < 1:1023910/49‑1 ATGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTGCAGTTTTGAT > 1:1153667/1‑47 GGATCCGGGTTGATCGCACAGTCACCGTAAACGTAAACCTGTTCCGGCAGCA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/2416428‑2416377‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcagcaTGAAGAACACGGAAGATACCAGGGAGCTGCCCGGTGCAGTTTTGATC < NC_000913/2416373‑2416327 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |