New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	2416377 =	12 (0.440)	13 (0.550)	11/84	0.6	53.6%	coding (1631/2145 nt)	pta	phosphate acetyltransferase
	?	NC_000913	= 2416373	12 (0.510)					coding (1627/2145 nt)	pta	phosphate acetyltransferase

GATCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAAC  >  NC_000913/2416327‑2416420                                               |                                                gATCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtg                                               <  1:1023910‑M2/49‑3 (MQ=255) gATCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtg                                               <  1:371269‑M2/49‑3 (MQ=255)  aTCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgc                                              >  1:946869‑M2/1‑46 (MQ=255)  aTCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgc                                              >  1:1907350‑M2/1‑46 (MQ=255)  aTCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAt                                                >  1:1153667‑M2/1‑46 (MQ=255)      aaaCTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgctgct                                          <  1:1098341/49‑1 (MQ=255)      aaaCTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgctgct                                          >  1:179499/1‑49 (MQ=255)        aCTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgctgccgg                                        >  1:1098944‑M2/1‑40 (MQ=255)            cACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgctgccggaa                                      <  1:2079671‑M2/47‑12 (MQ=255)                 ggCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgctgccggaacaggttt                               >  1:1023182‑M2/1‑31 (MQ=255)                    aGCTCCCTGGTATCTTCCGTGTTCTTCAtgctgccggaacaggtttacg                            <  1:777622‑M2/49‑22 (MQ=255)                      cTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttac                          <  1:445390/49‑1 (MQ=255)                        cccTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttacgt                        >  1:1092707/1‑49 (MQ=255)                         ccTGGTATCTTCCGTGTTCTTCAtgctgccggaacaggtttacgttt                         >  1:1120719‑M2/1‑23 (MQ=255)                         ccTGGTATCTTCCGTGTTCTTCAtgctgccggaacaggtttacgttt                         >  1:417248‑M2/1‑23 (MQ=255)                             gTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttacgtttac                    <  1:1092578/48‑1 (MQ=255)                             gTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttacgtttac                    <  1:1236691/48‑1 (MQ=255)                             gTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttacgttta                     <  1:190145/47‑1 (MQ=255)                              tATCTTCCGTGTTCTTCAtgctgccggaacaggtttacgtttacggtga                  <  1:1256243‑M2/49‑32 (MQ=255)                              tATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACgg                  >  1:1403267/1‑49 (MQ=255)                                    ccGTGTTCTTCAtgctgccggaacaggtttacgtttacggtgactgt              >  1:1481099‑M2/1‑12 (MQ=255)                                    ccGTGTTCTTCAtgctgccggaacaggtttacgtttacggtgactgt              >  1:1269868‑M2/1‑12 (MQ=255)                                     cGTGTTCTTCAtgctgccggaacaggtttacgtttacggtgactgtgc            <  1:501493‑M2/48‑38 (MQ=255)                                       tgtTCTTCAtgctgccggaacaggtttacgtttacggtgactgtgcgat         >  1:1353221‑M2/1‑9 (MQ=255)                                       tgtTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGc         <  1:139013/49‑1 (MQ=255)                                       tgtTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGc         >  1:600508/1‑49 (MQ=255)                                            ttcAtgctgccggaacaggtttacgtttacggtgactgtgcgatcaacc    <  1:111077‑M2/49‑46 (MQ=255)                                              cATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATc     <  1:217365/46‑1 (MQ=255)                                              cATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATc     <  1:498699/46‑1 (MQ=255)                                               atgctgccggaacaggtttacgtttacggtgactgtgcgatcaacccg  <  1:109822‑M2/48‑48 (MQ=255)                                               |                                                GATCAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAAC  >  NC_000913/2416327‑2416420

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.