| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 2416377 = | 12 (0.440) | 13 (0.550) | 11/84 | 0.6 | 53.6% | coding (1631/2145 nt) | pta | phosphate acetyltransferase |
| ? | NC_000913 | = 2416373 | 12 (0.510) | coding (1627/2145 nt) | pta | phosphate acetyltransferase | |||||
CAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCG > NC_000913/2416330‑2416423 | gatcaaaactgcaccgggcagctccctggtatcttccgtgttcttcatg < 1:1023910‑M1/2‑1 (MQ=255)gatcaaaactgcaccgggcagctccctggtatcttccgtgttcttcatg < 1:371269‑M1/2‑1 (MQ=255) atcaaaactgcaccgggcagctccctggtatcttccgtgttcttcatgc > 1:946869‑M1/47‑49 (MQ=255) atcaaaactgcaccgggcagctccctggtatcttccgtgttcttcatgc > 1:1907350‑M1/47‑49 (MQ=255) atcaaaactgcaccgggcagctccctggtatcttccgtgttcttcat > 1:1153667‑M1/47‑47 (MQ=255) aaaCTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgctgct < 1:1098341/49‑1 (MQ=255) aaaCTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCAtgctgct > 1:179499/1‑49 (MQ=255) actgcaccgggcagctccctggtatcttccgtgttcttcaTGCTGCCgg > 1:1098944‑M1/41‑49 (MQ=255) caccgggcagctccctggtatcttccgtgttcttcaTGCTGCCGGaa < 1:2079671‑M1/11‑1 (MQ=255) ggcagctccctggtatcttccgtgttcttcaTGCTGCCGGAACAGgttt > 1:1023182‑M1/32‑49 (MQ=255) cTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttac < 1:445390/49‑1 (MQ=255) agctccctggtatcttccgtgttcttcaTGCTGCCGGAACAGgtttacg < 1:777622‑M1/21‑1 (MQ=255) cccTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttacgt > 1:1092707/1‑49 (MQ=255) cctggtatcttccgtgttcttcaTGCTGCCGGAACAGgtttacgttt > 1:1120719‑M1/24‑47 (MQ=255) cctggtatcttccgtgttcttcaTGCTGCCGGAACAGgtttacgttt > 1:417248‑M1/24‑47 (MQ=255) gTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttacgtttac < 1:1092578/48‑1 (MQ=255) gTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttacgtttac < 1:1236691/48‑1 (MQ=255) gTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGgtttacgttta < 1:190145/47‑1 (MQ=255) tATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACgg > 1:1403267/1‑49 (MQ=255) tatcttccgtgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGa < 1:1256243‑M1/31‑1 (MQ=255) tgtTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGc < 1:139013/49‑1 (MQ=255) tgtTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGc > 1:600508/1‑49 (MQ=255) ccgtgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACtgt > 1:1481099‑M1/13‑47 (MQ=255) ccgtgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACtgt > 1:1269868‑M1/13‑47 (MQ=255) cgtgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGc < 1:501493‑M1/37‑1 (MQ=255) tgttcttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGAt > 1:1353221‑M1/10‑49 (MQ=255) cATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATc < 1:217365/46‑1 (MQ=255) cATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATc < 1:498699/46‑1 (MQ=255) ttcaTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAAcc < 1:111077‑M1/45‑1 (MQ=255) aTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCg < 1:109822‑M1/47‑1 (MQ=255) | CAAAACTGCACCGGGCAGCTCCCTGGTATCTTCCGTGTTCTTCATGCTGCTGCCGGAACAGGTTTACGTTTACGGTGACTGTGCGATCAACCCG > NC_000913/2416330‑2416423 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |