| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 148 [0] | [0] 149 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 140 (1.340) | 71/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 151 total aligned reads displayed.
GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:6229329/50‑1GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:1878104/50‑1GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGA < 1:7447158/50‑1 AAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA < 1:1038876/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 1:1146044/1‑50 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC < 1:6270778/50‑1 AAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAAC > 1:797369/1‑50 AAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACG < 1:1539328/50‑1 AGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGT > 1:2261644/1‑50 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC < 1:1844015/50‑1 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:6843737/1‑50 GGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:5603401/1‑50 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:370947/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCT < 1:2451716/50‑1 GCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTC > 1:5978207/1‑49 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:7651926/1‑50 CAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:94352/1‑50 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTAC < 1:1841770/50‑1 AACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTA > 1:411954/1‑49 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA > 1:7694484/1‑50 ACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACA < 1:304783/50‑1 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC < 1:7327164/50‑1 CTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACAC < 1:3014657/50‑1 TGGTGTTTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:6854600/1‑50 TGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT > 1:4225585/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA < 1:2529462/50‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTA > 1:5466751/1‑50 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTT < 1:4355088/49‑1 GTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACT < 1:6974032/48‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC < 1:6235633/50‑1 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:5103501/1‑50 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC > 1:7648672/1‑50 TGATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTAC < 1:3374252/50‑1 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:2096334/1‑50 GATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACT > 1:1351237/1‑50 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC < 1:3606916/50‑1 ATTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTC > 1:3715560/1‑50 TTTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCC < 1:5051051/50‑1 TTTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCT > 1:4954123/1‑50 TTTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:3529798/1‑50 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:3900018/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG < 1:7353133/49‑1 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:7230075/1‑49 TTATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTG > 1:2925177/1‑49 TATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGT < 1:347074/49‑1 ATTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTA < 1:4039648/49‑1 TTGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAA < 1:1432247/50‑1 TGATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAAC > 1:6762114/1‑50 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:7737143/49‑1 ATTGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACC < 1:483442/49‑1 TGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:8106677/1‑50 TGCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:2459312/1‑50 GCTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT < 1:2730794/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCA < 1:6670892/50‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCA < 1:217986/50‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTC < 1:2877207/49‑1 CTGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCT > 1:3141442/1‑48 TGAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:6408803/1‑50 GAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:2532288/1‑49 GAGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:1895324/1‑49 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:7258926/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGA < 1:7156089/50‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGG < 1:7485016/49‑1 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG > 1:2736144/1‑48 AGTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAG < 1:1513257/48‑1 GTTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:67575/1‑50 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:5762157/1‑49 TTTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:2572429/1‑49 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:2684569/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:7583325/1‑48 TTTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAG > 1:2052839/1‑48 TTGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCA < 1:4976053/49‑1 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:4216339/1‑49 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:7794290/1‑49 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:2864108/1‑49 TGAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAG > 1:5637281/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:4423880/1‑49 GAATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGT > 1:5123022/1‑49 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:6087447/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:7993685/50‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA > 1:8056429/1‑50 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAA < 1:8098780/50‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:7953204/49‑1 AATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTA < 1:3408439/49‑1 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:2313734/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:213639/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:5426739/1‑50 ATACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAT > 1:3105613/1‑50 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:762600/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:3308244/50‑1 TACATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATG < 1:7920266/50‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 1:7464818/49‑1 CATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGA < 1:6388670/49‑1 ATTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAT > 1:5767107/1‑50 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:4718674/50‑1 TTGAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATC < 1:293192/50‑1 GAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCT < 1:6584565/49‑1 AACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTA > 1:7535661/1‑49 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA < 1:3962660/50‑1 ACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAC > 1:6153287/1‑49 GAAAAGGCAACTGGTGATTTTTATTGATTGCTGAGTTTTGAATACATTGAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/729314‑729364‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACA > NC_000913/738963‑739011 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |