| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 729,365 | Δ9,598 bp | rhsC–ybfD | rhsC, ybfB, ybfO, ybfC, ybfQ, ybfL, ybfD | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 729365 | 738962 | 9598 | 148 [0] | [0] 149 | rhsC–ybfD | rhsC,ybfB,ybfO,ybfC,ybfQ,ybfL,ybfD |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 729364 | 0 (0.000) | 140 (1.340) | 71/94 | 0.0 | 100% | intergenic (+24/‑219) | ybfA/rhsC | DUF2517 domain‑containing protein YbfA/rhs element protein RhsC |
| ? | NC_000913 | 738963 = | 0 (0.000) | intergenic (+110/‑38) | ybfD/ybgA | H repeat‑associated putative transposase YbfD/DUF1722 domain‑containing protein YbgA | |||||
Only 100 of 149 total aligned reads displayed.
AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 | aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:1146044‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:797369‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:4603‑M2/50‑50 (MQ=255)aaaggcaactggtgatttttattgattgctgagttttgaatacattgaac > 1:381252‑M2/50‑50 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt > 1:4147500‑M2/48‑50 (MQ=255) aggcaactggtgatttttattgattgctgagttttgaatacattgaaCGt > 1:2261644‑M2/48‑50 (MQ=255) ggcaactggtgatttttattgattgctgagttttgaatacattgaaCGTc > 1:6843737‑M2/47‑50 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTCt < 1:370947‑M2/5‑1 (MQ=255) gcaactggtgatttttattgattgctgagttttgaatacattgaaCGTCt < 1:2451716‑M2/5‑1 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:94352‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:7651926‑M2/45‑50 (MQ=255) caactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:6433407‑M2/45‑50 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTac < 1:1841770‑M2/7‑1 (MQ=255) aactggtgatttttattgattgctgagttttgaatacattgaaCGTCTa > 1:1286620‑M2/44‑49 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca < 1:304783‑M2/8‑1 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca > 1:143846‑M2/43‑50 (MQ=255) actggtgatttttattgattgctgagttttgaatacattgaaCGTCTaca > 1:7694484‑M2/43‑50 (MQ=255) ctggtgatttttattgattgctgagttttgaatacattgaaCGTCTacac < 1:3014657‑M2/9‑1 (MQ=255) ctggtgatttttattgattgctgagttttgaatacattgaaCGTCTacac < 1:7327164‑M2/9‑1 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:1635419‑M2/41‑50 (MQ=255) tggtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt > 1:6826126‑M2/41‑50 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACtt < 1:4355088‑M2/11‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACt < 1:6974032‑M2/10‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa < 1:2529462‑M2/12‑1 (MQ=255) gtgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTa > 1:5466751‑M2/39‑50 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc < 1:3374252‑M2/13‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc < 1:6235633‑M2/13‑1 (MQ=255) tgatttttattgattgctgagttttgaatacattgaaCGTCTACACTTAc > 1:7648672‑M2/38‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:1351237‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:2096334‑M2/37‑50 (MQ=255) gatttttattgattgctgagttttgaatacattgaaCGTCTACACTTACt > 1:5529541‑M2/37‑50 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc < 1:3606916‑M2/15‑1 (MQ=255) atttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTc > 1:3715560‑M2/36‑50 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 1:6231546‑M2/16‑1 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 1:5051051‑M2/16‑1 (MQ=255) tttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTcc < 1:5726430‑M2/16‑1 (MQ=255) ttttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCt > 1:4954123‑M2/34‑50 (MQ=255) tttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:3529798‑M2/33‑50 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:3900018‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:671593‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:426681‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:2925177‑M2/32‑49 (MQ=255) ttattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTg > 1:7230075‑M2/32‑49 (MQ=255) tattgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGt < 1:347074‑M2/19‑1 (MQ=255) attgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTa < 1:4039648‑M2/20‑1 (MQ=255) attgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTa < 1:5051387‑M2/20‑1 (MQ=255) attgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTa > 1:5282294‑M2/30‑49 (MQ=255) tgattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc > 1:1848880‑M2/28‑50 (MQ=255) gattgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAc < 1:7170024‑M2/23‑1 (MQ=255) attgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAAcc < 1:7737143‑M2/24‑1 (MQ=255) tgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:2459312‑M2/24‑50 (MQ=255) tgctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:8106677‑M2/24‑50 (MQ=255) gctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt < 1:2730794‑M2/27‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCt > 1:3141442‑M2/22‑48 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTc < 1:2877207‑M2/28‑1 (MQ=255) ctgagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCa < 1:217986‑M2/29‑1 (MQ=255) gagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:2532288‑M2/20‑49 (MQ=255) gagttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:1895324‑M2/20‑49 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAgg < 1:7485016‑M2/31‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg < 1:1513257‑M2/30‑1 (MQ=255) agttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAg > 1:2736144‑M2/19‑48 (MQ=255) gttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:67575‑M2/18‑50 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:2572429‑M2/17‑49 (MQ=255) ttttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:939091‑M2/17‑49 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:6127289‑M2/16‑48 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:7583325‑M2/16‑48 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:2684569‑M2/16‑48 (MQ=255) tttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAg > 1:2052839‑M2/16‑48 (MQ=255) ttgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCa < 1:4902124‑M2/35‑1 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:5637281‑M2/14‑49 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:2864108‑M2/14‑49 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:7794290‑M2/14‑49 (MQ=255) tgaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAg > 1:4216339‑M2/14‑49 (MQ=255) gaatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGt > 1:5123022‑M2/13‑49 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:6087447‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa < 1:8098780‑M2/39‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa > 1:8056429‑M2/12‑50 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTaa < 1:7993685‑M2/39‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTa < 1:7953204‑M2/38‑1 (MQ=255) aatacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTa < 1:3408439‑M2/38‑1 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:3105613‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:2313734‑M2/11‑50 (MQ=255) atacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAAt > 1:213639‑M2/11‑50 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:7920266‑M2/41‑1 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:3308244‑M2/41‑1 (MQ=255) tacattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATg < 1:762600‑M2/41‑1 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGaa > 1:4009654‑M2/8‑50 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGaa > 1:6332519‑M2/8‑50 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGa < 1:7464818‑M2/42‑1 (MQ=255) cattgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGa < 1:6388670‑M2/42‑1 (MQ=255) attgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAAt > 1:5767107‑M2/7‑50 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc > 1:7417154‑M2/6‑50 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc < 1:293192‑M2/45‑1 (MQ=255) ttgaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATc < 1:4718674‑M2/45‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:7308314‑M2/46‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:686922‑M2/46‑1 (MQ=255) gaaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCt < 1:6584565‑M2/46‑1 (MQ=255) aaCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTa > 1:7535661‑M2/3‑49 (MQ=255) aCGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTAc > 1:5834208‑M2/2‑49 (MQ=255) cGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACaa < 1:4916411/50‑1 (MQ=255) | AAATTTGTCCTGCTACAACAGGATTAACTTCACAAATATCATTTCTCAACGTCTACACTTACTCCTGTAAACCGCTCAGGAGCAGTAATGAATCTACAA > NC_000913/738914‑739012 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |