| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,204,350 | Δ32,368 bp | yehL–preA | 30 genes yehL, yehM, yehP, yehQ, yehR, yehS, btsR, btsS, mlrA, yohO, yehW, yehX, yehY, osmF, bglX, dld, pbpG, yohC, yohD, yohF, mdtQ, yohP, dusC, yohJ, yohK, cdd, sanA, yeiS, preT, preA |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2204350 | 2236717 | 32368 | 104 [0] | [0] 103 | yehL–preA | yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2204349 | 0 (0.000) | 101 (0.930) | 60/98 | 0.0 | 100% | intergenic (+60/‑247) | yehK/yehL | uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL |
| ? | NC_000913 | 2236718 = | 0 (0.000) | intergenic (+218/+25) | preA/mglC | NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit | |||||
Only 100 of 101 total aligned reads displayed.
TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > NC_000913/2236718‑2236766 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:5568551/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:3158654/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT < 1:2510387/50‑1TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:6668665/1‑50TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATAGCCTGGATTATT > 1:382616/1‑50 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:2915031/1‑49 AATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATT > 1:5590401/1‑49 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:5416335/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:4523124/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:6641789/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA > 1:1716432/1‑50 ATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGA < 1:456244/50‑1 TCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:5252988/1‑50 TCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:1157301/1‑50 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:6949031/1‑49 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:2720096/1‑49 CAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACC > 1:1080956/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGA < 1:107128/50‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGA < 1:2798582/50‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:2818012/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG < 1:4377026/49‑1 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:6187182/1‑49 AAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCG > 1:4803784/1‑49 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:6767173/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA > 1:4000576/1‑50 AATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAA < 1:453046/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 1:4697067/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:2168958/1‑50 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT < 1:365446/50‑1 ATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAAT > 1:8089806/1‑50 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:5841674/50‑1 TTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATG < 1:7243438/50‑1 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG > 1:1652795/1‑50 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:6016303/49‑1 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:808281/49‑1 GGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGC < 1:4160512/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGG < 1:3440719/50‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG < 1:5904762/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG < 1:1864240/49‑1 GTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCG < 1:4217694/49‑1 TCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGA > 1:7057415/1‑50 CCGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:7669589/1‑50 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:8271028/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:7185835/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:3856331/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACC < 1:3113836/50‑1 CGATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGAC > 1:6986624/1‑49 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:5295214/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:2639656/1‑50 GATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA < 1:292320/50‑1 ATCCGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCA > 1:2926414/1‑49 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:1473596/1‑50 CGGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:5995826/1‑50 GGCGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATT > 1:6744829/1‑49 CGCAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCAC < 1:4535853/50‑1 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT > 1:67877/1‑50 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT < 1:493629/50‑1 CAACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACAT < 1:5321909/50‑1 AACGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATC < 1:2654141/50‑1 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT < 1:2597836/50‑1 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT > 1:6190784/1‑50 CGTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCAT < 1:1340721/50‑1 GTCCCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATT > 1:7273852/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:2410639/1‑50 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:5074948/49‑1 CCAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTC < 1:7510966/49‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTT < 1:2099449/50‑1 CAATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCT > 1:4491455/1‑49 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:2112772/50‑1 AATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTA < 1:1244230/50‑1 ATGGCCTGGATTATTGACCTAATGCGGACCACATTCACATCATTTCTTAC > 1:7022850/1‑50 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:1024575/50‑1 ATGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTAC < 1:4651656/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG > 1:1550366/1‑50 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG < 1:1635072/50‑1 TGGCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACG < 1:4959241/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG < 1:4035895/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG > 1:4801172/1‑50 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG < 1:2673996/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCG < 1:6499382/50‑1 GCCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGC < 1:2562368/49‑1 CCTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGC < 1:2688299/50‑1 CTGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:337023/1‑50 TGGATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCG > 1:8185627/1‑49 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT < 1:3094866/50‑1 GATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAT < 1:4468854/50‑1 ATTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATT < 1:7328869/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:6091648/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:1027986/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT < 1:3821456/50‑1 TTATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:3794304/1‑50 TATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:6699059/1‑49 TATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:6546674/1‑49 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTC < 1:6276137/49‑1 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:3844036/1‑48 ATTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTT > 1:1935735/1‑48 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > 1:7193011/1‑50 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:7436142/49‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:6026304/49‑1 TTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCA < 1:5757038/49‑1 TAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2204301‑2204349‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑TGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAG > NC_000913/2236718‑2236766 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |