Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,204,350 Δ32,368 bp yehL–preA 30 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2204350 2236717 32368 104 [0] [0] 103 yehL–preA yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22043490 (0.000)101 (0.930) 60/98 0.0 100% intergenic (+60/‑247) yehK/yehL uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL
?NC_000913 2236718 = 0 (0.000)intergenic (+218/+25) preA/mglC NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit

Only 100 of 104 total aligned reads displayed.

ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG  >  NC_000913/2204300‑2204398
                                                 |                                                 
ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat                                                   >  1:4648528/1‑50 (MQ=255)
ataatTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATtat                                                   <  1:6102334/50‑1 (MQ=255)
 tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                  >  1:6668665‑M1/1‑49 (MQ=255)
 tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                  <  1:3158654‑M1/50‑2 (MQ=255)
 tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                  <  1:2510387‑M1/50‑2 (MQ=255)
 tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                  <  1:5568551‑M1/50‑2 (MQ=255)
 tAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATAGCCTGGATTATt                                                  >  1:382616‑M1/1‑49 (MQ=255)
  aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                  >  1:2915031‑M1/1‑48 (MQ=255)
  aaTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATt                                                  >  1:5590401‑M1/1‑48 (MQ=255)
   aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga                                                >  1:4523124‑M1/1‑47 (MQ=255)
   aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga                                                <  1:456244‑M1/50‑4 (MQ=255)
   aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga                                                >  1:6641789‑M1/1‑47 (MQ=255)
   aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga                                                >  1:1716432‑M1/1‑47 (MQ=255)
   aTTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtga                                                >  1:5416335‑M1/1‑47 (MQ=255)
     tCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc                                              >  1:5252988‑M1/1‑45 (MQ=255)
     tCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc                                              >  1:1157301‑M1/1‑45 (MQ=255)
      cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc                                              >  1:6949031‑M1/1‑44 (MQ=255)
      cAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgacc                                              >  1:1080956‑M1/1‑44 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccga                                            <  1:107128‑M1/50‑8 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccga                                            <  1:2798582‑M1/50‑8 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg                                             <  1:4377026‑M1/49‑7 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg                                             >  1:4803784‑M1/1‑43 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg                                             >  1:6187182‑M1/1‑43 (MQ=255)
       aaaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccg                                             >  1:2818012‑M1/1‑43 (MQ=255)
        aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa                                           >  1:6767173‑M1/1‑42 (MQ=255)
        aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa                                           <  1:453046‑M1/50‑9 (MQ=255)
        aaTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaa                                           >  1:4000576‑M1/1‑42 (MQ=255)
         aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat                                          <  1:365446‑M1/50‑10 (MQ=255)
         aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat                                          >  1:8089806‑M1/1‑41 (MQ=255)
         aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat                                          <  1:4697067‑M1/50‑10 (MQ=255)
         aTTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaat                                          >  1:2168958‑M1/1‑41 (MQ=255)
          ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg                                         <  1:5841674‑M1/50‑11 (MQ=255)
          ttGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatg                                         <  1:7243438‑M1/50‑11 (MQ=255)
            ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg                                       >  1:1652795‑M1/1‑38 (MQ=255)
            ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc                                        <  1:4160512‑M1/49‑12 (MQ=255)
            ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc                                        <  1:808281‑M1/49‑12 (MQ=255)
            ggTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgc                                        <  1:6016303‑M1/49‑12 (MQ=255)
             gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgg                                      <  1:3440719‑M1/50‑14 (MQ=255)
             gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg                                       <  1:1864240‑M1/49‑13 (MQ=255)
             gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg                                       <  1:4217694‑M1/49‑13 (MQ=255)
             gTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcg                                       <  1:5904762‑M1/49‑13 (MQ=255)
              tCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcgga                                     >  1:7057415‑M1/1‑36 (MQ=255)
               ccGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac                                    >  1:7669589‑M1/1‑35 (MQ=255)
                cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacc                                   <  1:8271028‑M1/50‑17 (MQ=255)
                cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacc                                   <  1:3856331‑M1/50‑17 (MQ=255)
                cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacc                                   <  1:3113836‑M1/50‑17 (MQ=255)
                cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacc                                   <  1:7185835‑M1/50‑17 (MQ=255)
                cGATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggac                                    >  1:6986624‑M1/1‑34 (MQ=255)
                 gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca                                  <  1:292320‑M1/50‑18 (MQ=255)
                 gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca                                  >  1:5295214‑M1/1‑33 (MQ=255)
                 gATCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca                                  >  1:2639656‑M1/1‑33 (MQ=255)
                  aTCCGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggacca                                  >  1:2926414‑M1/1‑32 (MQ=255)
                     cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt                              >  1:5995826‑M1/1‑29 (MQ=255)
                     cGGCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt                              >  1:1473596‑M1/1‑29 (MQ=255)
                      ggCGCAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacatt                              >  1:6744829‑M1/1‑28 (MQ=255)
                          cAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat                         <  1:493629‑M1/50‑27 (MQ=255)
                          cAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat                         <  1:5321909‑M1/50‑27 (MQ=255)
                          cAACGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacat                         >  1:67877‑M1/1‑24 (MQ=255)
                           aaCGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatc                        <  1:2654141‑M1/50‑28 (MQ=255)
                             cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat                      <  1:2597836‑M1/50‑30 (MQ=255)
                             cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat                      >  1:6190784‑M1/1‑21 (MQ=255)
                             cGTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcat                      <  1:1340721‑M1/50‑30 (MQ=255)
                              gTCCCAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatt                     >  1:7273852‑M1/1‑20 (MQ=255)
                                 ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct                  >  1:2410639‑M1/1‑17 (MQ=255)
                                 ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc                   <  1:5074948‑M1/49‑33 (MQ=255)
                                 ccAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttc                   <  1:7510966‑M1/49‑33 (MQ=255)
                                  cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctt                 <  1:2099449‑M1/50‑35 (MQ=255)
                                  cAATGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttct                  >  1:4491455‑M1/1‑16 (MQ=255)
                                   aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta                >  1:889320‑M1/1‑15 (MQ=255)
                                   aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta                <  1:2112772‑M1/50‑36 (MQ=255)
                                   aaTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttctta                <  1:1244230‑M1/50‑36 (MQ=255)
                                    aTGGCCTGGATTATtgacctaatgcggaccacattcacatcatttcttac               >  1:7022850‑M1/1‑14 (MQ=255)
                                    aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac               <  1:1024575‑M1/50‑37 (MQ=255)
                                    aTGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttac               <  1:4651656‑M1/50‑37 (MQ=255)
                                     tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg              <  1:4959241‑M1/50‑38 (MQ=255)
                                     tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg              >  1:1550366‑M1/1‑13 (MQ=255)
                                     tGGCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacg              <  1:1635072‑M1/50‑38 (MQ=255)
                                       gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcg            >  1:4801172‑M1/1‑11 (MQ=255)
                                       gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcg            <  1:6499382‑M1/50‑40 (MQ=255)
                                       gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcg            <  1:4035895‑M1/50‑40 (MQ=255)
                                       gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcg            <  1:2673996‑M1/50‑40 (MQ=255)
                                       gCCTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgc             <  1:2562368‑M1/49‑39 (MQ=255)
                                        ccTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgc           <  1:2688299‑M1/50‑41 (MQ=255)
                                         cTGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg          >  1:337023‑M1/1‑9 (MQ=255)
                                          tGGATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcg          >  1:8185627‑M1/1‑8 (MQ=255)
                                            gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgtat       <  1:3094866‑M1/50‑45 (MQ=255)
                                            gATTATtgaccgaatgcggaccacattcacatcatttcttacgcgcgtat       <  1:4468854‑M1/50‑45 (MQ=255)
                                             attattgaccgaatgcggaccacattcacatcatttcttacgcgcgtatt      <  1:7328869‑M1/50‑46 (MQ=255)
                                              ttattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt     >  1:3794304‑M1/1‑4 (MQ=255)
                                              ttattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt     <  1:3821456‑M1/50‑47 (MQ=255)
                                              ttattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt     <  1:6091648‑M1/50‑47 (MQ=255)
                                              ttattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt     <  1:1027986‑M1/50‑47 (MQ=255)
                                               tattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt     >  1:6699059‑M1/1‑3 (MQ=255)
                                               tattgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt     >  1:6546674‑M1/1‑3 (MQ=255)
                                                attgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt     >  1:3844036‑M1/1‑2 (MQ=255)
                                                attgaccgaatgcggaccacattcacatcatttcttacgcgcgtattt     >  1:1935735‑M1/1‑2 (MQ=255)
                                                 ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttcag  >  1:7193011‑M1/1‑1 (MQ=255)
                                                 ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca   <  1:5757038‑M1/49‑49 (MQ=255)
                                                 ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca   <  1:7436142‑M1/49‑49 (MQ=255)
                                                 ttgaccgaatgcggaccacattcacatcatttcttacgcgcgtatttca   <  1:6026304‑M1/49‑49 (MQ=255)
                                                 |                                                 
ATAATTCAAATTGGTCCGATCCGGCGCAACGTCCCAATGGCCTGGATTATAAATCTCATTATCTTAATTGCAACGGGGTCCAGCCGTGGTTATAATTCG  >  NC_000913/2204300‑2204398

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.