Predicted mutation
evidence seq id position mutation annotation gene description
MC JC NC_000913 2,204,350 Δ32,368 bp yehL–preA 30 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NC_000913 2204350 2236717 32368 104 [0] [0] 103 yehL–preA yehL,yehM,yehP,yehQ,yehR,yehS,btsR,btsS,mlrA,yohO,yehW,yehX,yehY,osmF,bglX,dld,pbpG,yohC,yohD,yohF,mdtQ,yohP,dusC,yohJ,yohK,cdd,sanA,yeiS,preT,preA

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 22043490 (0.000)101 (0.930) 60/98 0.0 100% intergenic (+60/‑247) yehK/yehL uncharacterized protein YehK/putative AAA(+) MoxR family ATPase YehL
?NC_000913 2236718 = 0 (0.000)intergenic (+218/+25) preA/mglC NAD‑dependent dihydropyrimidine dehydrogenase subunit PreA/D‑galactose/methyl‑galactoside ABC transporter membrane subunit

Only 100 of 103 total aligned reads displayed.

CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGT  >  NC_000913/2236669‑2236767
                                                 |                                                 
taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt                                                   <  1:2510387‑M2/1‑1 (MQ=255)
taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt                                                   <  1:3158654‑M2/1‑1 (MQ=255)
taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt                                                   <  1:5568551‑M2/1‑1 (MQ=255)
taattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt                                                   >  1:6668665‑M2/50‑50 (MQ=255)
taattcaaattggtccgatccggcgcaacgtcccaatagcctggattatt                                                   >  1:382616‑M2/50‑50 (MQ=255)
 aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt                                                   >  1:5590401‑M2/49‑49 (MQ=255)
 aattcaaattggtccgatccggcgcaacgtcccaatggcctggattatt                                                   >  1:2915031‑M2/49‑49 (MQ=255)
  attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa                                                 >  1:5416335‑M2/48‑50 (MQ=255)
  attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa                                                 >  1:1716432‑M2/48‑50 (MQ=255)
  attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa                                                 >  1:4523124‑M2/48‑50 (MQ=255)
  attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa                                                 >  1:6641789‑M2/48‑50 (MQ=255)
  attcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGa                                                 <  1:456244‑M2/3‑1 (MQ=255)
    tcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc                                               >  1:5252988‑M2/46‑50 (MQ=255)
    tcaaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc                                               >  1:1157301‑M2/46‑50 (MQ=255)
     caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc                                               >  1:1080956‑M2/45‑49 (MQ=255)
     caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc                                               >  1:6949031‑M2/45‑49 (MQ=255)
     caaattggtccgatccggcgcaacgtcccaatggcctggattatTGAcc                                               >  1:2720096‑M2/45‑49 (MQ=255)
      aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg                                              >  1:2818012‑M2/44‑49 (MQ=255)
      aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg                                              >  1:6187182‑M2/44‑49 (MQ=255)
      aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg                                              <  1:4377026‑M2/6‑1 (MQ=255)
      aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCg                                              >  1:4803784‑M2/44‑49 (MQ=255)
      aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGa                                             <  1:107128‑M2/7‑1 (MQ=255)
      aaattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGa                                             <  1:2798582‑M2/7‑1 (MQ=255)
       aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa                                            >  1:6767173‑M2/43‑50 (MQ=255)
       aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa                                            >  1:4000576‑M2/43‑50 (MQ=255)
       aattggtccgatccggcgcaacgtcccaatggcctggattatTGACCGaa                                            <  1:453046‑M2/8‑1 (MQ=255)
        attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt                                           <  1:365446‑M2/9‑1 (MQ=255)
        attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt                                           <  1:4697067‑M2/9‑1 (MQ=255)
        attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt                                           >  1:8089806‑M2/42‑50 (MQ=255)
        attggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAAt                                           >  1:2168958‑M2/42‑50 (MQ=255)
         ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg                                          <  1:5841674‑M2/10‑1 (MQ=255)
         ttggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATg                                          <  1:7243438‑M2/10‑1 (MQ=255)
           ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc                                         <  1:808281‑M2/11‑1 (MQ=255)
           ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc                                         <  1:6016303‑M2/11‑1 (MQ=255)
           ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGc                                         <  1:4160512‑M2/11‑1 (MQ=255)
           ggtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg                                        >  1:1652795‑M2/39‑50 (MQ=255)
            gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCgg                                       <  1:3440719‑M2/13‑1 (MQ=255)
            gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg                                        <  1:1864240‑M2/12‑1 (MQ=255)
            gtccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCg                                        <  1:4217694‑M2/12‑1 (MQ=255)
             tccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGa                                      >  1:7057415‑M2/37‑50 (MQ=255)
              ccgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc                                     >  1:7669589‑M2/36‑50 (MQ=255)
               cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAcc                                    <  1:3113836‑M2/16‑1 (MQ=255)
               cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAcc                                    <  1:3856331‑M2/16‑1 (MQ=255)
               cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAcc                                    <  1:7185835‑M2/16‑1 (MQ=255)
               cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAcc                                    <  1:8271028‑M2/16‑1 (MQ=255)
               cgatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGAc                                     >  1:6986624‑M2/35‑49 (MQ=255)
                gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca                                   <  1:292320‑M2/17‑1 (MQ=255)
                gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca                                   >  1:5295214‑M2/34‑50 (MQ=255)
                gatccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca                                   >  1:2639656‑M2/34‑50 (MQ=255)
                 atccggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACca                                   >  1:2926414‑M2/33‑49 (MQ=255)
                    cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt                               >  1:5995826‑M2/30‑50 (MQ=255)
                    cggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt                               >  1:1473596‑M2/30‑50 (MQ=255)
                     ggcgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACAtt                               >  1:6744829‑M2/29‑49 (MQ=255)
                       cgcaacgtcccaatggcctggattatTGACCGAATGCGGACCACATTcac                            <  1:4535853‑M2/24‑1 (MQ=255)
                         caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat                          <  1:493629‑M2/26‑1 (MQ=255)
                         caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat                          >  1:67877‑M2/25‑50 (MQ=255)
                         caacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcat                          <  1:5321909‑M2/26‑1 (MQ=255)
                          aacgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatc                         <  1:2654141‑M2/27‑1 (MQ=255)
                            cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat                       <  1:2597836‑M2/29‑1 (MQ=255)
                            cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat                       <  1:1340721‑M2/29‑1 (MQ=255)
                            cgtcccaatggcctggattatTGACCGAATGCGGACCACATTCAcatcat                       >  1:6190784‑M2/22‑50 (MQ=255)
                             gtcccaatggcctggattatTGACCGAATGCGGACCACATTCACATCAtt                      >  1:7273852‑M2/21‑50 (MQ=255)
                                ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc                    <  1:5074948‑M2/32‑1 (MQ=255)
                                ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTc                    <  1:7510966‑M2/32‑1 (MQ=255)
                                ccaatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt                   >  1:2410639‑M2/18‑50 (MQ=255)
                                 caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCtt                  <  1:2099449‑M2/34‑1 (MQ=255)
                                 caatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCt                   >  1:4491455‑M2/17‑49 (MQ=255)
                                  aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa                 <  1:2112772‑M2/35‑1 (MQ=255)
                                  aatggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTa                 <  1:1244230‑M2/35‑1 (MQ=255)
                                   atggcctggattatTGACCTAATGCGGACCACATTCACATCATTTCTTAc                >  1:7022850‑M2/15‑50 (MQ=255)
                                   atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc                <  1:4651656‑M2/36‑1 (MQ=255)
                                   atggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAc                <  1:1024575‑M2/36‑1 (MQ=255)
                                    tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg               <  1:1635072‑M2/37‑1 (MQ=255)
                                    tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg               >  1:1550366‑M2/14‑50 (MQ=255)
                                    tggcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcg               <  1:4959241‑M2/37‑1 (MQ=255)
                                      gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg             <  1:2673996‑M2/39‑1 (MQ=255)
                                      gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg             >  1:4801172‑M2/12‑50 (MQ=255)
                                      gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg             <  1:6499382‑M2/39‑1 (MQ=255)
                                      gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcg             <  1:4035895‑M2/39‑1 (MQ=255)
                                      gcctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgc              <  1:2562368‑M2/38‑1 (MQ=255)
                                       cctggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgc            <  1:2688299‑M2/40‑1 (MQ=255)
                                         tggattatTGACCGAATGCGGACCACATTCACATCATTTCTTAcgcgcg           >  1:8185627‑M2/9‑49 (MQ=255)
                                           gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAt        <  1:4468854‑M2/44‑1 (MQ=255)
                                           gattatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAt        <  1:3094866‑M2/44‑1 (MQ=255)
                                            attatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAtt       <  1:7328869‑M2/45‑1 (MQ=255)
                                             ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt      <  1:1027986‑M2/46‑1 (MQ=255)
                                             ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt      <  1:6091648‑M2/46‑1 (MQ=255)
                                             ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt      <  1:3821456‑M2/46‑1 (MQ=255)
                                             ttatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt      >  1:3794304‑M2/5‑50 (MQ=255)
                                              tatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt      >  1:6546674‑M2/4‑49 (MQ=255)
                                              tatTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt      >  1:6699059‑M2/4‑49 (MQ=255)
                                               atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt      >  1:1935735‑M2/3‑48 (MQ=255)
                                               atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTAttt      >  1:3844036‑M2/3‑48 (MQ=255)
                                               atTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTc     <  1:6276137‑M2/47‑1 (MQ=255)
                                                tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa    <  1:6026304‑M2/48‑1 (MQ=255)
                                                tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa    <  1:7436142‑M2/48‑1 (MQ=255)
                                                tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCa    <  1:5757038‑M2/48‑1 (MQ=255)
                                                tTGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAg   >  1:7193011‑M2/2‑50 (MQ=255)
                                                 tGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGt  >  1:671152/1‑50 (MQ=255)
                                                 tGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGt  >  1:6561372/1‑50 (MQ=255)
                                                 |                                                 
CCTTATCCGGCCTACAAAACCACACAGATCATGATGTTATGTGCGTTTATGACCGAATGCGGACCACATTCACATCATTTCTTACGCGCGTATTTCAGT  >  NC_000913/2236669‑2236767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑