| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 155 [0] | [0] 159 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 149 (1.430) | 69/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
Only 100 of 158 total aligned reads displayed.
GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAAA > NC_000913/2998869‑2998917 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 1:2327700/1‑50 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 1:2310112/1‑50 TGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA > 1:7801378/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 1:2581354/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 1:2423524/1‑50 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT < 1:5258239/50‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA < 1:6128784/48‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA < 1:7539909/48‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA < 1:771320/48‑1 TAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCA < 1:7532994/48‑1 AGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACT > 1:860648/1‑49 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA < 1:8085531/50‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTA < 1:7443284/50‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTT < 1:4396789/49‑1 GATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTT < 1:3175/49‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT < 1:1876418/50‑1 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT > 1:3165015/1‑50 ATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTAT < 1:1617614/50‑1 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT > 1:2079541/1‑50 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT > 1:4064638/1‑50 TTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT < 1:455570/50‑1 TTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATT > 1:386644/1‑49 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 1:4933755/49‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT > 1:1192731/1‑49 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT > 1:246398/1‑49 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 1:152165/49‑1 TGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTT < 1:8207699/49‑1 GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAA > 1:3392681/1‑50 GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTA < 1:2825138/49‑1 GTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTA < 1:229712/49‑1 TTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAAC < 1:2841561/50‑1 ACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACA < 1:2921486/49‑1 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAAC > 1:8117129/1‑50 CACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAA < 1:7349630/49‑1 TCCGCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTT > 1:6294726/1‑49 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAA < 1:7528920/50‑1 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA > 1:3318035/1‑49 GCTATAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAA > 1:6172672/1‑49 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAA < 1:6512368/50‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAA < 1:7181736/50‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATA < 1:6261598/49‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATA < 1:3763908/49‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATA < 1:2547959/49‑1 TAGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAAT < 1:4670650/48‑1 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG > 1:3665342/1‑50 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG > 1:5357843/1‑50 AGCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG > 1:169442/1‑50 GCTTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAG < 1:8080916/49‑1 TTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTG > 1:3005476/1‑50 TTTCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTG > 1:1177997/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 1:3095613/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT > 1:7939745/1‑50 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGT < 1:87096/49‑1 TCTTCAGATCTTTATAGCCCACTTATTTAACAACTT‑AAAATAAGGTGT < 1:5455213/48‑1 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 1:1013309/1‑50 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 1:5697220/1‑50 CTTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTT < 1:3130963/49‑1 TTCAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT > 1:3468608/1‑49 CAGATCTTTATAGCCCTCTTATTTAACAACTTGAAAATAAGGTGTTTTA < 1:6319611/49‑1 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC > 1:101247/1‑50 CAGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTA < 1:2367985/49‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACC < 1:6573834/50‑1 AGATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTAC < 1:762259/49‑1 GATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCT < 1:1252758/50‑1 ATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG > 1:5098548/1‑50 ATCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG > 1:2798882/1‑50 TCTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGG > 1:6688753/1‑50 CTTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGG > 1:6353972/1‑50 TTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT > 1:4654402/1‑50 TTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT > 1:1573847/1‑50 TTTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGT > 1:2956693/1‑50 TTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT > 1:4219563/1‑50 TTATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT > 1:4454642/1‑50 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTG > 1:3876799/1‑50 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTT < 1:6767295/49‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGG < 1:7679727/46‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTG < 1:4221333/45‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:3560299/40‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTT < 1:5789722/40‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:6956038/39‑1 TATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTT < 1:4856263/39‑1 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:950917/1‑50 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTG < 1:6084253/49‑1 ATAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTG < 1:1768378/49‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTT < 1:1601996/50‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTT < 1:6730974/50‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTT < 1:6026985/50‑1 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT > 1:8291768/1‑49 TAGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGT < 1:5840262/49‑1 AGCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 1:581247/1‑50 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 1:6285818/1‑49 GCCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTA > 1:5742021/1‑49 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA < 1:3052755/50‑1 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA < 1:2919255/50‑1 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA < 1:1839097/50‑1 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTAC > 1:2677736/1‑49 CCCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTAC > 1:3760410/1‑49 CCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAA < 1:5132744/50‑1 CCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA > 1:6773437/1‑49 CCACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACA > 1:7184611/1‑49 GCTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2994941‑2994991‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ccACTTATTTAACAACTTGAAAATAAGGTGTTTTACCTGGGTTGTTACAAA > NC_000913/2998869‑2998917 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |