| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 2,994,992 | Δ3,877 bp | [ygeL]–ygeQ | [ygeL], ygeN, ygeO, insD‑4, insC‑4, ygeP, ygeQ | |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 2994992 | 2998868 | 3877 | 155 [0] | [0] 159 | [ygeL]–ygeQ | [ygeL],ygeN,ygeO,insD‑4,insC‑4,ygeP,ygeQ |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2994991 | 0 (0.000) | 149 (1.430) | 69/94 | 0.0 | 100% | pseudogene (102/156 nt) | ygeL | protein YgeL |
| ? | NC_000913 | 2998869 = | 0 (0.000) | intergenic (‑41/+115) | ygeQ/glyU | protein YgeQ/tRNA‑Gly | |||||
Only 100 of 155 total aligned reads displayed.
CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC > NC_000913/2994942‑2995039 | cTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCC < 1:6019510‑M1/50‑1 (MQ=255) tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:2310112‑M1/1‑49 (MQ=255) tGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa > 1:7801378‑M1/1‑49 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact < 1:5258239‑M1/50‑4 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:6304178‑M1/48‑2 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:7532994‑M1/48‑2 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:7539909‑M1/48‑2 (MQ=255) tAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCa < 1:771320‑M1/48‑2 (MQ=255) aGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact > 1:860648‑M1/1‑46 (MQ=255) aGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCact > 1:7319290‑M1/1‑46 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta < 1:7443284‑M1/50‑6 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta < 1:7625111‑M1/50‑6 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactta < 1:8085531‑M1/50‑6 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactt < 1:4396789‑M1/49‑5 (MQ=255) gATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCactt < 1:2834113‑M1/49‑5 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:1617614‑M1/50‑7 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:3693361‑M1/50‑7 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat > 1:3165015‑M1/1‑44 (MQ=255) aTTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttat < 1:1876418‑M1/50‑7 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt < 1:455570‑M1/50‑8 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt < 1:3136423‑M1/50‑8 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt > 1:310642‑M1/1‑43 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt > 1:4064638‑M1/1‑43 (MQ=255) tttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt > 1:2079541‑M1/1‑43 (MQ=255) ttGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatt > 1:386644‑M1/1‑42 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:152165‑M1/49‑9 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:4933755‑M1/49‑9 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt > 1:1192731‑M1/1‑41 (MQ=255) tGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattt < 1:8207699‑M1/49‑9 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:2825138‑M1/49‑10 (MQ=255) gTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttattta < 1:2847507‑M1/49‑10 (MQ=255) acacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa > 1:2550157‑M1/1‑37 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac > 1:8117129‑M1/1‑36 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaac < 1:2430952‑M1/50‑15 (MQ=255) cacTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaa < 1:7349630‑M1/49‑14 (MQ=255) tCCGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaactt > 1:2717302‑M1/1‑33 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttga > 1:6184984‑M1/1‑31 (MQ=255) cGCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttga > 1:6467214‑M1/1‑31 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaa < 1:2322557‑M1/50‑21 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaa < 1:7528920‑M1/50‑21 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaa > 1:3318035‑M1/1‑30 (MQ=255) gCTATAGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaa > 1:6172672‑M1/1‑30 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataa < 1:6512368‑M1/50‑25 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataa < 1:7181736‑M1/50‑25 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaata < 1:2547959‑M1/49‑24 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat < 1:3786077‑M1/48‑23 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat < 1:611776‑M1/48‑23 (MQ=255) taGCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaat < 1:4670650‑M1/48‑23 (MQ=255) gCTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataag < 1:8080916‑M1/49‑26 (MQ=255) cTTTCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggt < 1:2381222‑M1/50‑28 (MQ=255) tttCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg > 1:6648405‑M1/1‑22 (MQ=255) tttCTTCAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtg > 1:1177997‑M1/1‑22 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtt > 1:3095613‑M1/1‑20 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtt > 1:7939745‑M1/1‑20 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgt < 1:4043070‑M1/49‑30 (MQ=255) tcttcAGATCTTTATAGCCCacttatttaacaacttaaaataaggtgt < 1:5455213‑M1/48‑29 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttt > 1:5697220‑M1/1‑19 (MQ=255) cttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttt > 1:1013309‑M1/1‑19 (MQ=255) ttcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttt > 1:3468608‑M1/1‑18 (MQ=255) tcAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta > 1:8323443‑M1/1‑17 (MQ=255) cAGATCTTTATAGCCCtcttatttaacaacttgaaaataaggtgtttta < 1:6319611‑M1/49‑34 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac > 1:101247‑M1/1‑16 (MQ=255) cAGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgtttta < 1:2367985‑M1/49‑34 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacc < 1:2948920‑M1/50‑36 (MQ=255) aGATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttac < 1:762259‑M1/49‑35 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:1252758‑M1/50‑37 (MQ=255) gATCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacct < 1:324656‑M1/50‑37 (MQ=255) aTCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctg > 1:5098548‑M1/1‑13 (MQ=255) tCTTTATAGCCCacttatttaacaacttgaaaataaggtgttttacctgg > 1:6688753‑M1/1‑12 (MQ=255) tttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggt > 1:1573847‑M1/1‑10 (MQ=255) tttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggt > 1:4654402‑M1/1‑10 (MQ=255) tttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggt > 1:2956693‑M1/1‑10 (MQ=255) ttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt > 1:4454642‑M1/1‑9 (MQ=255) ttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt > 1:3047284‑M1/1‑9 (MQ=255) ttATAGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt > 1:4219563‑M1/1‑9 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctgggtt < 1:6767295‑M1/49‑42 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttttacctg < 1:4221333‑M1/45‑38 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:3560299‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:5789722‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgtttt < 1:2197502‑M1/40‑33 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttt < 1:7064353‑M1/39‑32 (MQ=255) tataGCCCacttatttaacaacttgaaaataaggtgttt < 1:4856263‑M1/39‑32 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:950917‑M1/1‑7 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:3456424‑M1/1‑7 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt > 1:167542‑M1/1‑7 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg < 1:6084253‑M1/49‑43 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg < 1:1587166‑M1/49‑43 (MQ=255) ataGCCCacttatttaacaacttgaaaataaggtgttttacctgggttg < 1:1768378‑M1/49‑43 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtt < 1:6730974‑M1/50‑45 (MQ=255) taGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgt < 1:5840262‑M1/49‑44 (MQ=255) aGCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:581247‑M1/1‑5 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgttac < 1:533593‑M1/50‑47 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:6285818‑M1/1‑4 (MQ=255) gCCCacttatttaacaacttgaaaataaggtgttttacctgggttgtta > 1:5742021‑M1/1‑4 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca < 1:1839097‑M1/50‑48 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca < 1:2919255‑M1/50‑48 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttac > 1:2677736‑M1/1‑3 (MQ=255) cccacttatttaacaacttgaaaataaggtgttttacctgggttgttac > 1:3760410‑M1/1‑3 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttacaa < 1:5132744‑M1/50‑49 (MQ=255) ccacttatttaacaacttgaaaataaggtgttttacctgggttgttaca > 1:6773437‑M1/1‑2 (MQ=255) | CTGTAGATTTGTTACACTCCGCTATAGCTTTCTTCAGATCTTTATAGCCCCCAACAACCTCATATAAATCAGGATAATGTCCGAGAAATCCAATTATC > NC_000913/2994942‑2995039 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |