| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,090,347 | Δ708 bp | coding (1‑708/708 nt) | endA → | DNA‑specific endonuclease I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3090347 | 3091054 | 708 | 99 [0] | [0] 102 | endA | DNA‑specific endonuclease I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090346 | 0 (0.000) | 98 (0.900) | 56/98 | 0.0 | 100% | intergenic (+94/‑1) | yggI/endA | conserved protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3091055 = | 0 (0.000) | intergenic (+1/‑79) | endA/rsmE | DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase | |||||
CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > NC_000913/3091055‑3091103 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGC > 1:3236815/1‑50 CAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC < 1:670143/50‑1 CAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 1:1874172/1‑50 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCT < 1:3319146/50‑1 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCT < 1:1598302/50‑1 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCT < 1:576084/50‑1 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 1:4731216/1‑49 AAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCC > 1:4157696/1‑49 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 1:2830043/1‑50 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 1:5460466/1‑50 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 1:4562158/1‑50 AAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTA > 1:6103913/1‑50 AACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTAC < 1:2425805/50‑1 AACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTAC < 1:8085372/50‑1 ACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACA < 1:5605494/50‑1 ACAGCTTTCGCTACGTTGCTGGCTAGTTTTAACACGGAG‑AAGTGCCTACA < 1:15184/50‑1 AGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACT < 1:6219533/50‑1 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG > 1:175321/1‑50 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG < 1:6006714/50‑1 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG > 1:4994505/1‑50 CTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAG < 1:5399937/50‑1 TTTCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC > 1:1084698/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 1:5625642/1‑50 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 1:6390635/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 1:639270/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCG < 1:7184706/49‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC < 1:1246469/48‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC < 1:4821411/48‑1 TCGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGC < 1:7809496/48‑1 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG > 1:7823031/1‑49 CGCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGG < 1:2320585/49‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 1:2711935/50‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 1:5530969/50‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA > 1:7727033/1‑50 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 1:3302978/50‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGA < 1:2878478/50‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGG < 1:1753887/49‑1 GCTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGG < 1:7877881/49‑1 CTACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGAT > 1:2474682/1‑50 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 1:4086194/1‑50 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 1:4382924/1‑50 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 1:3114221/1‑50 TACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT > 1:5227508/1‑50 ACGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC > 1:5762393/1‑50 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTC < 1:4549975/49‑1 CGTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATT < 1:2215277/48‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:5227348/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT < 1:5966887/50‑1 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:2604726/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:6287128/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:4621026/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT > 1:456338/1‑50 GTTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTT < 1:6102010/50‑1 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 1:817999/50‑1 TTGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTT < 1:5251919/50‑1 TGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT > 1:6689548/1‑50 TGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT > 1:6222029/1‑50 TGCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT > 1:4253714/1‑50 GCTGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTT < 1:698698/49‑1 TGGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:6729132/1‑50 GGCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT > 1:2861306/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTA < 1:7622299/50‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT > 1:1373090/1‑49 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT < 1:1614138/49‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTT < 1:6067445/49‑1 GCTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGT < 1:3898821/48‑1 CTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAA > 1:2453246/1‑50 CTCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAA < 1:3703153/50‑1 TCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAAC > 1:1114458/1‑50 TCGTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAAC > 1:7324119/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:2541761/1‑50 GTTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCC > 1:5293890/1‑50 TTTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC < 1:4371301/50‑1 TTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:4644164/1‑49 TTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:661104/1‑49 TTTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCC > 1:3424646/1‑49 TTAACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTA > 1:3916501/1‑50 AACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC > 1:7579605/1‑50 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC < 1:4885671/50‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC < 1:1209052/50‑1 ACACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACC < 1:664080/49‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 1:6938167/50‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCC < 1:510879/50‑1 CACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCC > 1:100737/1‑49 ACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCA < 1:256286/50‑1 ACGGAG‑AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCA < 1:598852/50‑1 agAAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCG < 1:5004538/48‑1 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 1:2260364/1‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA > 1:1655020/1‑50 AAGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTA < 1:3164476/50‑1 AGTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC < 1:6015515/50‑1 GTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACA < 1:3015641/50‑1 GTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACA < 1:7616945/50‑1 GTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACA < 1:1637204/50‑1 GTGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAC > 1:5718680/1‑49 TGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA > 1:6936912/1‑50 TGCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAA > 1:5474022/1‑50 GCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > 1:5102050/1‑50 CCAAAACAGCTTTCGCTACGTTGCTGGCTCGTTTTAACACGGAGTAAGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3090297‑3090346‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAC > NC_000913/3091055‑3091103 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |