| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 3,090,347 | Δ708 bp | coding (1‑708/708 nt) | endA → | DNA‑specific endonuclease I |
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 3090347 | 3091054 | 708 | 99 [0] | [0] 102 | endA | DNA‑specific endonuclease I |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3090346 | 0 (0.000) | 98 (0.900) | 56/98 | 0.0 | 100% | intergenic (+94/‑1) | yggI/endA | conserved protein YggI/DNA‑specific endonuclease I |
| ? | NC_000913 | 3091055 = | 0 (0.000) | intergenic (+1/‑79) | endA/rsmE | DNA‑specific endonuclease I/16S rRNA m(3)U1498 methyltransferase | |||||
Only 100 of 102 total aligned reads displayed.
CAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACC > NC_000913/3091006‑3091104 | ccaaaacagctttcgctacgttgctggctcgttttaacacggagaagtgc > 1:3236815‑M2/50‑50 (MQ=255) caaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc < 1:670143‑M2/2‑1 (MQ=255) caaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:1874172‑M2/49‑50 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:4157696‑M2/48‑49 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgcc > 1:4731216‑M2/48‑49 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCt < 1:3319146‑M2/3‑1 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCt < 1:1598302‑M2/3‑1 (MQ=255) aaaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCt < 1:576084‑M2/3‑1 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 1:2830043‑M2/47‑50 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 1:6103913‑M2/47‑50 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 1:5460466‑M2/47‑50 (MQ=255) aaacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTa > 1:4562158‑M2/47‑50 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTac < 1:8085372‑M2/5‑1 (MQ=255) aacagctttcgctacgttgctggctcgttttaacacggagaagtgCCTac < 1:2425805‑M2/5‑1 (MQ=255) acagctttcgctacgttgctggctcgttttaacacggagaagtgCCTaca < 1:5605494‑M2/6‑1 (MQ=255) acagctttcgctacgttgctggctagttttaacacggagaagtgCCTaca < 1:15184‑M2/6‑1 (MQ=255) agctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACt < 1:6219533‑M2/8‑1 (MQ=255) ctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAg > 1:4994505‑M2/41‑50 (MQ=255) ctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAg < 1:5399937‑M2/10‑1 (MQ=255) ctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAg > 1:175321‑M2/41‑50 (MQ=255) ctttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAg < 1:6006714‑M2/10‑1 (MQ=255) tttcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc > 1:1084698‑M2/40‑50 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc < 1:4821411‑M2/11‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc < 1:7809496‑M2/11‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGc < 1:1246469‑M2/11‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCgg > 1:5625642‑M2/38‑50 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCg < 1:6390635‑M2/12‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCg < 1:7184706‑M2/12‑1 (MQ=255) tcgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCg < 1:639270‑M2/12‑1 (MQ=255) cgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCgg > 1:7823031‑M2/37‑49 (MQ=255) cgctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCgg < 1:2320585‑M2/13‑1 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCggg < 1:1753887‑M2/14‑1 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCggg < 1:7877881‑M2/14‑1 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa < 1:2711935‑M2/15‑1 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa < 1:5530969‑M2/15‑1 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa < 1:3302978‑M2/15‑1 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa > 1:7727033‑M2/36‑50 (MQ=255) gctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGa < 1:2878478‑M2/15‑1 (MQ=255) ctacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAt > 1:2474682‑M2/35‑50 (MQ=255) tacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAtt > 1:4086194‑M2/34‑50 (MQ=255) tacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAtt > 1:5227508‑M2/34‑50 (MQ=255) tacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAtt > 1:4382924‑M2/34‑50 (MQ=255) tacgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAtt > 1:3114221‑M2/34‑50 (MQ=255) acgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTc > 1:5762393‑M2/33‑50 (MQ=255) cgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGAtt < 1:2215277‑M2/17‑1 (MQ=255) cgttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTc < 1:4549975‑M2/18‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 1:456338‑M2/31‑50 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 1:5227348‑M2/31‑50 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 1:2604726‑M2/31‑50 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 1:4621026‑M2/31‑50 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt < 1:5966887‑M2/20‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt < 1:6102010‑M2/20‑1 (MQ=255) gttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtt > 1:6287128‑M2/31‑50 (MQ=255) ttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCttt < 1:817999‑M2/21‑1 (MQ=255) ttgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCttt < 1:5251919‑M2/21‑1 (MQ=255) tgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt > 1:6689548‑M2/29‑50 (MQ=255) tgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt > 1:6222029‑M2/29‑50 (MQ=255) tgctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt > 1:4253714‑M2/29‑50 (MQ=255) gctggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCtttt < 1:698698‑M2/22‑1 (MQ=255) tggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt > 1:6729132‑M2/26‑50 (MQ=255) ggctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt > 1:2861306‑M2/25‑49 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGtt < 1:6067445‑M2/26‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGtt > 1:1373090‑M2/24‑49 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGtt < 1:1614138‑M2/26‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGt < 1:3898821‑M2/25‑1 (MQ=255) gctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTa < 1:7622299‑M2/27‑1 (MQ=255) ctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTaa < 1:3703153‑M2/28‑1 (MQ=255) ctcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTaa > 1:2453246‑M2/23‑50 (MQ=255) tcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAc > 1:1114458‑M2/22‑50 (MQ=255) tcgttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAc > 1:7324119‑M2/22‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc > 1:2541761‑M2/20‑50 (MQ=255) gttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAccc > 1:5293890‑M2/20‑50 (MQ=255) ttttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc < 1:4371301‑M2/32‑1 (MQ=255) tttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 1:3424646‑M2/18‑49 (MQ=255) tttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 1:4644164‑M2/18‑49 (MQ=255) tttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAAcccc > 1:661104‑M2/18‑49 (MQ=255) ttaacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTa > 1:3916501‑M2/17‑50 (MQ=255) aacacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcc > 1:7579605‑M2/15‑50 (MQ=255) acacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAccc < 1:1209052‑M2/37‑1 (MQ=255) acacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcc < 1:664080‑M2/36‑1 (MQ=255) cacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcccc < 1:6938167‑M2/38‑1 (MQ=255) cacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAcccc < 1:510879‑M2/38‑1 (MQ=255) cacggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTAccc > 1:100737‑M2/13‑49 (MQ=255) acggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCa < 1:256286‑M2/39‑1 (MQ=255) acggagaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCa < 1:598852‑M2/39‑1 (MQ=255) agaagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCAcgcg < 1:5004538‑M2/43‑1 (MQ=255) aagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTa > 1:2260364‑M2/6‑50 (MQ=255) aagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTa > 1:1655020‑M2/6‑50 (MQ=255) aagtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTa < 1:3164476‑M2/45‑1 (MQ=255) agtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAc < 1:6015515‑M2/46‑1 (MQ=255) gtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTAc > 1:5718680‑M2/4‑49 (MQ=255) gtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACa < 1:1637204‑M2/47‑1 (MQ=255) gtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACa < 1:7616945‑M2/47‑1 (MQ=255) gtgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACa < 1:3015641‑M2/47‑1 (MQ=255) tgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACaa > 1:6936912‑M2/3‑50 (MQ=255) tgCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACaa > 1:5474022‑M2/3‑50 (MQ=255) gCCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAc > 1:5102050‑M2/2‑50 (MQ=255) ccTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAcc < 1:4132311/50‑1 (MQ=255) ccTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAcc > 1:7272348/1‑50 (MQ=255) ccTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAAc < 1:5419501/49‑1 (MQ=255) | CAATCATAACCCGTATGTGCAACGCGCTTGCCAGGCGCGAAAGAGCTAACCTACACTAGCGGGATTCTTTTTGTTAACCCCTACCCCACGCGTACAACC > NC_000913/3091006‑3091104 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |