| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 380111 | 0 (0.000) | 79 (0.940) +CGAGATGGACG |
44/76 | 0.0 | 63.3% | coding (732/774 nt) | yaiO | outer membrane protein YaiO |
| ? | NC_000913 | 624576 = | 119 (1.090) | intergenic (‑66/‑309) | fepB/entC | ferric enterobactin ABC transporter periplasmic binding protein/isochorismate synthase EntC | |||||
Only 100 of 204 total aligned reads displayed.
ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 | atttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgg < 1:5333337‑M2/1‑1 (MQ=255) tttccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGt < 1:1961919‑M2/2‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt < 1:2375787/50‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt < 1:7341615/50‑1 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:62019/1‑50 (MQ=255) ttaATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGt > 1:5712166/1‑50 (MQ=255) ttataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:8182491/3‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:812595/1‑50 (MQ=255) taataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTc > 1:4294901/1‑50 (MQ=255) tccaggtcagacgggctgcaagttgcagaccgttacgagatggacgGTcc > 1:5838617‑M2/47‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 1:1983611/1‑50 (MQ=255) aataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcc > 1:2189639/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc > 1:614070/1‑50 (MQ=255) ataaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTccc < 1:3426908/50‑1 (MQ=255) taaGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTcccc < 1:2320436/50‑1 (MQ=255) caggtcagacgggctgcaagttgcagaccgttacgagatggacgGTcccc > 1:4039376‑M2/45‑50 (MQ=255) ggtcagacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTc < 1:2922529‑M2/8‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:5148243/50‑1 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc > 1:728838/1‑50 (MQ=255) aGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTc < 1:3810299/50‑1 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCg > 1:8108171/1‑50 (MQ=255) gTTAAGGGCGTAATGACAAATTCGCCAAAGCGCACAATCCGTCCCCTCGc > 1:3050926/1‑50 (MQ=255) ttAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcc > 1:610813/1‑50 (MQ=255) ttAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcc > 1:6665901/1‑50 (MQ=255) ttAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGcc > 1:1264306/1‑50 (MQ=255) tAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGccc > 1:4697400/1‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGccc > 1:181927‑M2/39‑50 (MQ=255) agacgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGccc > 1:2576938‑M2/39‑50 (MQ=255) aaGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGccc < 1:1384422/49‑1 (MQ=255) acgggctgcaagttgcagaccgttacgagatggacgGTCCCCTCgccccc > 1:7470015‑M2/37‑49 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt < 1:6030287/50‑1 (MQ=255) gggCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCtt < 1:7876928/50‑1 (MQ=255) cgggctgcaagttgcagaccgttacgagatggacgGTCCCCTcgccccct > 1:7548549‑M2/36‑48 (MQ=255) cgggctgcaagttgcagaccgttacgagatggacgGTCCCCTcgccccct > 1:3954026‑M2/36‑48 (MQ=255) gggctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCctt < 1:4211483‑M2/16‑1 (MQ=255) gCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTg > 1:7860729/1‑50 (MQ=255) gctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTgg < 1:7762271‑M2/18‑1 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgg < 1:6404950/50‑1 (MQ=255) cGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTgg > 1:6527318/1‑50 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg < 1:2645123/50‑1 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:6497962/1‑50 (MQ=255) gTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:4332344/1‑50 (MQ=255) ctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 1:6882195‑M2/32‑50 (MQ=255) ctgcaagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTggg > 1:6316209‑M2/32‑50 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:4967611/1‑49 (MQ=255) aaTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:2533805/1‑48 (MQ=255) aaTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:1402117/1‑48 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTggg > 1:3991723/1‑47 (MQ=255) aTGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgag < 1:3615596/50‑1 (MQ=255) tGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGgaga < 1:5386537/50‑1 (MQ=255) tGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGga > 1:1233999/1‑48 (MQ=255) aagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGgaga < 1:6638572‑M2/23‑1 (MQ=255) aagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGga > 1:6798483‑M2/28‑48 (MQ=255) aagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGga > 1:3718930‑M2/28‑48 (MQ=255) aagttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGga > 1:1524811‑M2/28‑48 (MQ=255) gACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGagag > 1:1414950/1‑50 (MQ=255) gACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGagag > 1:7055602/1‑50 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag < 1:208342‑M2/24‑1 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag < 1:4720543‑M2/24‑1 (MQ=255) agttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGagag < 1:28285‑M2/24‑1 (MQ=255) gttgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAgg > 1:1172482‑M2/26‑50 (MQ=255) aCAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGagag < 1:5643151/49‑1 (MQ=255) aCAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAgg > 1:2700725/1‑50 (MQ=255) cAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAggg < 1:2664459/50‑1 (MQ=255) tgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:1762431‑M2/24‑50 (MQ=255) tgcagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGt > 1:7416155‑M2/24‑50 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:7970024/1‑50 (MQ=255) aaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:8168240/1‑49 (MQ=255) aaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:5473347/1‑49 (MQ=255) aaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGt > 1:4244769/1‑49 (MQ=255) cagaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTa < 1:4903029‑M2/29‑1 (MQ=255) agaccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAg > 1:7122441‑M2/21‑50 (MQ=255) tCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg > 1:7329698/1‑50 (MQ=255) cGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg < 1:5512659/49‑1 (MQ=255) accgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg < 1:2978048‑M2/32‑1 (MQ=255) accgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAggg < 1:21101‑M2/32‑1 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:7031654/1‑50 (MQ=255) gACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGt > 1:7203637/1‑50 (MQ=255) ccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 1:2971231‑M2/33‑1 (MQ=255) ccgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGt < 1:5870038‑M2/33‑1 (MQ=255) cgttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTg < 1:2151045‑M2/34‑1 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGa < 1:3637529‑M2/35‑1 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGa < 1:6477723‑M2/35‑1 (MQ=255) gttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGa < 1:3117000‑M2/35‑1 (MQ=255) ttacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAg > 1:1292570‑M2/15‑50 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg > 1:224342/1‑50 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg > 1:6684956/1‑50 (MQ=255) aaaGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAg < 1:4187440/50‑1 (MQ=255) tacgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgg > 1:1001293‑M2/14‑50 (MQ=255) acgagatggacgGTCCCCTCGCCCCCTTGGGGAGAGGGTTAGGGTGAgg < 1:3269114‑M2/37‑1 (MQ=255) aGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAggg < 1:1880596/50‑1 (MQ=255) acaATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGaa > 1:353058/1‑48 (MQ=255) caATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcag > 1:2694780/1‑50 (MQ=255) aaTCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:5112477/1‑50 (MQ=255) tCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:7495689/1‑48 (MQ=40) ccGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:442266/1‑50 (MQ=255) ccGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:59729/1‑50 (MQ=255) cGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccag > 1:3517201/1‑49 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCa > 1:6911197/1‑50 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCa > 1:4732991/1‑50 (MQ=255) | ATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCA > NC_000913/624527‑624625 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |