| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| MC JC | NC_000913 | 332,366 | Δ44,951 bp | pdeL–yaiL | 39 genes pdeL, yahB, yahC, yahD, yahE, yahF, yahG, yahH, yahI, yahJ, yahK, yahL, yahM, yahN, yahO, prpR, prpB, prpC, prpD, prpE, codB, codA, cynR, cynT, cynS, cynX, lacA, lacY, lacZ, lacI, mhpR, mhpA, mhpB, mhpC, mhpD, mhpF, mhpE, mhpT, yaiL |
|
| Missing coverage evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | start | end | size | ←reads | reads→ | gene | description | |||
| * | * | ÷ | NC_000913 | 332366 | 377316 | 44951 | 162 [0] | [0] 162 | pdeL–yaiL | pdeL,yahB,yahC,yahD,yahE,yahF,yahG,yahH,yahI,yahJ,yahK,yahL,yahM,yahN,yahO,prpR,prpB,prpC,prpD,prpE,codB,codA,cynR,cynT,cynS,cynX,lacA,lacY,lacZ,lacI,mhpR,mhpA,mhpB,mhpC,mhpD,mhpF,mhpE,mhpT,yaiL |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 332365 | 0 (0.000) | 159 (1.470) | 77/98 | 0.0 | 100% | intergenic (+489/‑6) | yahV/pdeL | protein YahV/DNA‑binding transcriptional activator/c‑di‑GMP phosphodiesterase PdeL |
| ? | NC_000913 | 377317 = | NA (NA) | intergenic (+6/+218) | yaiL/frmB | DUF2058 domain‑containing protein YaiL/S‑formylglutathione hydrolase FrmB | |||||
Only 100 of 159 total aligned reads displayed.
GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332317‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAG > NC_000913/377317‑377365 AATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA < 1:6206585/50‑1 ATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT < 1:6504717/50‑1 ATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT < 1:4069088/50‑1 ATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGA > 1:7836832/1‑49 TCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATA < 1:1853610/50‑1 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:399057/1‑48 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:2973464/1‑48 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:2846099/1‑48 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:253911/1‑48 CGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGAT > 1:6920488/1‑48 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:2557111/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:3893053/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:7543839/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG > 1:7730218/1‑50 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAG < 1:1276582/50‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAA < 1:4444520/49‑1 GACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAA < 1:5969850/49‑1 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTC < 1:5602249/50‑1 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTC > 1:6298153/1‑50 CAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTC < 1:8130853/50‑1 AGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCG < 1:3034357/50‑1 AGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCG > 1:5991051/1‑50 AGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCG < 1:1806671/50‑1 GTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTG < 1:4259531/50‑1 GTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTG < 1:6363531/50‑1 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC < 1:4269277/50‑1 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC > 1:5424826/1‑50 TAATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGC < 1:7335493/50‑1 AATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG > 1:2342940/1‑50 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGC < 1:5070095/50‑1 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGC < 1:4676538/50‑1 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG < 1:5084127/49‑1 ATCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCG < 1:1421588/49‑1 TCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCA < 1:5939099/50‑1 TCACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCA < 1:4967968/50‑1 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGA < 1:8003615/50‑1 ACTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAG < 1:1893933/49‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:4882710/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:5163421/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT > 1:3014519/1‑50 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT < 1:386510/50‑1 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT > 1:3903021/1‑50 CTCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGAT > 1:6962661/1‑50 TCATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG > 1:2940694/1‑50 CATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGC > 1:5339954/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCC > 1:2400292/1‑50 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGC < 1:6560466/49‑1 ATACTGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATG < 1:5646282/48‑1 ATACTGAACAGCGAGAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCC < 1:2135350/50‑1 TGAACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT > 1:2650690/1‑50 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGC < 1:5381112/50‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATG < 1:584226/49‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:7730706/48‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:8112608/48‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:2451631/48‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:7165376/48‑1 AACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGAT < 1:2061465/48‑1 ACAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCG < 1:3504526/50‑1 CAGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGA > 1:5618827/1‑50 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC > 1:4166951/1‑50 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:1559463/50‑1 AGCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGAC < 1:1718176/50‑1 GCGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACG < 1:877512/50‑1 CGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC < 1:6414204/50‑1 CGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:7754108/1‑50 CGATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGC > 1:7560257/1‑50 GATAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCT < 1:8050818/50‑1 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT < 1:8314289/50‑1 TAAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTAT > 1:6265093/1‑50 AAAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG > 1:5500465/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:4224333/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC > 1:267146/1‑50 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC < 1:1520804/50‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGC < 1:5521813/50‑1 AAAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATG < 1:2204310/49‑1 AAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCG > 1:8126511/1‑50 AAGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCG > 1:2190426/1‑50 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC < 1:6665592/50‑1 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC > 1:933201/1‑50 AGATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGC > 1:5169959/1‑50 GATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCG > 1:1473/1‑50 ATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGT < 1:1021116/50‑1 ATAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGT > 1:8056673/1‑50 TAAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTC > 1:3171999/1‑50 AAAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:3405459/1‑50 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTT < 1:204881/50‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:2922594/1‑49 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT < 1:1713813/49‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT < 1:196861/49‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT < 1:2735217/49‑1 AAGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCT > 1:3875924/1‑49 AGGTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTA > 1:6902018/1‑50 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATC < 1:3143030/50‑1 GTGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATC < 1:2023084/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:2809916/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:3370036/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCA < 1:106739/50‑1 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:6168824/1‑48 TGGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTAT > 1:5556181/1‑48 GGATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAG > 1:5760818/1‑50 GAATCGACAGGTAATCACTCATACTGAACAGCGATAAAAGATAAAGGTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/332317‑332365‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GATAAGTCGTGCGCAGATGCCTGATGCGACGCTATGCGCGTCTTATCAG > NC_000913/377317‑377365 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |